RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 VPS35Q96QK1 796 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 FCRL5Q96RD9 977 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 VAT1Q99536 393 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 CTRCQ99895 268 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 ZPBPQ9BS86 351 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 HEMGNQ9BXL5 484 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 UCK1Q9HA47 277 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 HACD3Q9P035 362 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 TRHDEQ9UKU6 1024 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 hCG_1818297A0A087WSY0 165 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 LILRA5A6NI73 299 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 H7C0C1 242 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 RAD1O60671 282 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 UBXN7O94888 489 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 ZIC2O95409 532 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 TYRP1P17643 537 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 WT1P19544 449 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 CYLC1P35663 651 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 HMGCLP35914 325 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 ATP5OP48047 213 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 ARSDP51689 593 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 CYP4F2P78329 520 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 TMEM115Q12893 351 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 NOMO1Q15155 1222 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 PPP2R5EQ16537 467 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 ATP13A5Q4VNC0 1218 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 SARM1Q6SZW1 724 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 TMEM26Q6ZUK4 368 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 TRAPPC5Q8IUR0 188 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF567Q8N184 647 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 BMPERQ8N8U9 685 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 TC2NQ8N9U0 490 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 IPMKQ8NFU5 416 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 BLOC1S5Q8TDH9 187 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 KIAA1143Q96AT1 154 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 CXorf40BQ96DE9 158 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 QKIQ96PU8 341 aaKnown RBP eCLIP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 FERMT1Q9BQL6 677 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 IL26Q9NPH9 171 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 FBXO8Q9NRD0 319 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 SCHIP1Q9P0W5 487 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 TRIM10Q9UDY6 481 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 RSPH14Q9UHP6 348 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 PKP3Q9Y446 797 aa12.26□□□□□ -0.45
SREBF1-215ENST00000487401 HEMK1Q9Y5R4 338 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-215ENST00000487401 GCN1Q92616 2671 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 POLR1CO15160 346 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 SLC28A2O43868 658 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 KCNJ13O60928 360 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 LCA5LO95447 670 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 LIFP15018 202 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 HLA-DPA1P20036 260 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 RPL10P27635 214 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 MAP4P27816 1152 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 SPAM1P38567 509 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 SLC19A1P41440 591 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 HALP42357 657 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 NAP1L1P55209 391 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 NFATC3Q12968 1075 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 MPP3Q13368 585 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 CHRNA6Q15825 494 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 LDLRAP1Q5SW96 308 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 AGAP9Q5VTM2 703 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 ABRAXAS1Q6UWZ7 409 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 WASH2PQ6VEQ5 465 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 RBM12BQ8IXT5 1001 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 NLGN4XQ8N0W4 816 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 TTC30BQ8N4P2 665 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 NLGN4YQ8NFZ3 816 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 OXNAD1Q96HP4 312 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 CALR3Q96L12 384 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 MRGPRX2Q96LB1 330 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 FSD1LQ9BXM9 530 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 ZCCHC2Q9C0B9 1178 aaKnown RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 WASH6PQ9NQA3 447 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 POT1Q9NUX5 634 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF624Q9P2J8 865 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-215ENST00000487401 TMPRSS11EQ9UL52 423 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 CFAP46Q8IYW2 2715 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 RP1P56715 2156 aa12.25□□□□□ -0.45
SREBF1-215ENST00000487401 GLYATL1P3A0A0U1RQE8 302 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF891A8MT65 544 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 STX7O15400 261 aaKnown RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 CAPN5O15484 640 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A9O60656 530 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 PPFIA2O75334 1257 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 POP7O75817 140 aaKnown RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 RASSF9O75901 435 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 STK10O94804 968 aaKnown RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 IPO7O95373 1038 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms