RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 AGO1Q9UL18 857 aaKnown RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 PPIEQ9UNP9 301 aaKnown RBP4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 TRPV2Q9Y5S1 764 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 EEA1Q15075 1411 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 TTC3P53804 2025 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 NLRP1Q9C000 1473 aa4.94□□□□□ -1.62
PRPF38A-203ENST00000487160 LNP1A1A4G5 178 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 A6NL46 340 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 EIF4E1BA6NMX2 242 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 MAP2K7O14733 419 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 SPINT2O43291 252 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 PLRG1O43660 514 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 RSL1D1O76021 490 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 APOBEC1P41238 236 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 LIG4P49917 911 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 CXCL9Q07325 125 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 Q0VFX4 171 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 MAD2L1Q13257 205 aaPredicted RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 AMZ1Q400G9 498 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 TDRD12Q587J7 1177 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 FAM133BQ5BKY9 247 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 FAM69BQ5VUD6 431 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF425Q6IV72 752 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 WDR73Q6P4I2 378 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 PLPPR4Q7Z2D5 763 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 TECPR1Q7Z6L1 1165 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 NRROSQ86YC3 692 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 RASGEF1CQ8N431 466 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 PCDH20Q8N6Y1 951 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 MCUQ8NE86 351 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 OR2AK2Q8NG84 335 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 OR14A16Q8NHC5 309 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 GSDMBQ8TAX9 411 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 PTPMT1Q8WUK0 201 aaPredicted RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 WASF1Q92558 559 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF622Q969S3 477 aaKnown RBP eCLIP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 HMCESQ96FZ2 354 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 SLC25A33Q9BSK2 321 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 MRPL1Q9BYD6 325 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 SPRY4Q9C004 299 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 OR10A4Q9H209 315 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 NOX4Q9NPH5 578 aa4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 DBNLQ9UJU6 430 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 COL16A1Q07092 1604 aaPredicted RBP4.93□□□□□ -1.62
PRPF38A-203ENST00000487160 SHPRHQ149N8 1683 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 GPATCH8Q9UKJ3 1502 aaKnown RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 SRCAPQ6ZRS2 3230 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 GPR75-ASB3A0A0A6YYF3 556 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TSPY2A6NKD2 308 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 H7C0S8 307 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 PSMD10O75832 226 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 DDNO94850 711 aaPredicted RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ZWINTO95229 277 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 BCL10O95999 233 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 CRYABP02511 175 aaKnown RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 APOA4P06727 396 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TPOP07202 933 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ABCB1P08183 1280 aaPredicted RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TSPY3P0CV98 308 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TSPY8P0CW00 308 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 PRLRP16471 622 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 SSTR2P30874 369 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 CAPZA2P47755 286 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF81P51508 661 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TSPY1Q01534 308 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 CTF1Q16619 201 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 DECR1Q16698 335 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 KYNUQ16719 465 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ERMARDQ5T6L9 678 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 FRG2Q64ET8 278 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ZBTB8BQ8NAP8 495 aaPredicted RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 WFIKKN2Q8TEU8 576 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 DUSP19Q8WTR2 217 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 PTERQ96BW5 349 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 PGAP3Q96FM1 320 aaPredicted RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 DGAT2Q96PD7 388 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 SMC6Q96SB8 1091 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 DDOQ99489 341 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 CMKLR1Q99788 373 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 CCDC106Q9BWC9 280 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TMEM39BQ9GZU3 492 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ZCCHC17Q9NP64 241 aaKnown RBP4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 ZNF148Q9UQR1 794 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 PCDHGA5Q9Y5G8 931 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 SNX9Q9Y5X1 595 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 PLEKHH2Q8IVE3 1493 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 CKAP5Q14008 2032 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 MAP3K1Q13233 1512 aa4.92□□□□□ -1.62
PRPF38A-203ENST00000487160 TIAM1Q13009 1591 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 KIAA1107Q9UPP5 1409 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 LINC01553A4QN01 128 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 TBX10O75333 385 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 SERPINI2O75830 405 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 TOMM40O96008 361 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 GH2P01242 217 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 TAS2R38P59533 333 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 DDR1Q08345 913 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 KRT33BQ14525 404 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms