RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SARS2Q9NP81 518 aaKnown RBP6.98□□□□□ -1.29
SF3A3-206ENST00000487062 TRPV5Q9NQA5 729 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 KCTD5Q9NXV2 234 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 KCNK4Q9NYG8 393 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 DCTN4Q9UJW0 460 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 PPM1HQ9ULR3 514 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 RNF112Q9ULX5 631 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 DNAJC16Q9Y2G8 782 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-206ENST00000487062 STON1Q9Y6Q2 735 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 CKAP5Q14008 2032 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 LRRK1Q38SD2 2015 aa6.98□□□□□ -1.29
SF3A3-206ENST00000487062 PIKFYVEQ9Y2I7 2098 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 PRRC2BQ5JSZ5 2229 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LAMA2P24043 3122 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 BPTFQ12830 3046 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 A8MT66 165 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SLCO1B7G3V0H7 640 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 EIF3FO00303 357 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ARNTLO00327 626 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 NEMP1O14524 444 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 WNT9AO14904 365 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 KPNA5O15131 536 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ITM2AO43736 263 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ZBTB14O43829 449 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SYNCRIPO60506 623 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 KERAO60938 352 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LYPLA1O75608 230 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 IPO13O94829 963 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ADH1BP00325 375 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SBK3P0C264 359 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 KITP10721 976 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ADRB3P13945 408 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 MSH3P20585 1137 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 AKT1P31749 480 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 PSMD8P48556 350 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LIG3P49916 1009 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 GALK1P51570 392 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 NAGLUP54802 743 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 NFKB2Q00653 900 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TIAL1Q01085 375 aaKnown RBP eCLIP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TAGLNQ01995 201 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ZBTB16Q05516 673 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 RALGDSQ12967 914 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 PRKAA1Q13131 559 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SMAD4Q13485 552 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ENPP2Q13822 863 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ADGRE1Q14246 886 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 STARD3Q14849 445 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 PUS10Q3MIT2 529 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 POM121L1PQ3SYA9 428 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TMEM52BQ4KMG9 183 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ATP13A5Q4VNC0 1218 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LACTB2Q53H82 288 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LDLRAP1Q5SW96 308 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 EGFLAMQ63HQ2 1017 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 BRICD5Q6PL45 260 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 BLOC1S3Q6QNY0 202 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 MACC1Q6ZN28 852 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 Q6ZVL8 140 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ERN2Q76MJ5 926 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF765Q7L2R6 523 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CYP2U1Q7Z449 544 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TRMT11Q7Z4G4 463 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 HSD11B1LQ7Z5J1 315 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TECPR1Q7Z6L1 1165 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ISCA2Q86U28 154 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 RALGPS2Q86X27 583 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 MMAAQ8IVH4 418 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CHPFQ8IZ52 775 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 MYO1HQ8N1T3 1032 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CCNYL1Q8N7R7 359 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SIDT2Q8NBJ9 832 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TXNDC5Q8NBS9 432 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CD200R1Q8TD46 325 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CXorf40AQ8TE69 158 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CCT6BQ92526 530 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 DNASE1L2Q92874 299 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 KIAA1191Q96A73 305 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ARRDC3Q96B67 414 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 FAM136AQ96C01 138 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LINGO1Q96FE5 620 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 PDLIM5Q96HC4 596 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ASB2Q96Q27 587 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LRRC37BQ96QE4 947 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 VPS35Q96QK1 796 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 FAM129BQ96TA1 746 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 USB1Q9BQ65 265 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TRMOQ9BU70 441 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 RPP25Q9BUL9 199 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 TMEM120AQ9BXJ8 343 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 HDAC8Q9BY41 377 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 UNKQ9C0B0 810 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 ACTR5Q9H9F9 607 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 FBRSQ9HAH7 460 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 EML4Q9HC35 981 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 PRSS16Q9NQE7 514 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 LATS2Q9NRM7 1088 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SPATS2LQ9NUQ6 558 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 DNAAF2Q9NVR5 837 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms