RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 PGAM4Q8N0Y7 254 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 S100ZQ8WXG8 99 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 FEM1CQ96JP0 617 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 SIGLEC10Q96LC7 697 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 SYT11Q9BT88 431 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 C1orf21Q9H246 121 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 FLRT1Q9NZU1 646 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ADAMTS7Q9UKP4 1686 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 KAT6AQ92794 2004 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 C4AP0C0L4 1744 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 A0A1W2PQ67 120 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 FAM159BA6NKW6 160 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 CNTN5O94779 1100 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PABPC4LP0CB38 370 aaKnown RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PSMB9P28065 219 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 POU1F1P28069 291 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 AP1S1P61966 158 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 GRSF1Q12849 480 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PERM1Q5SV97 790 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 MORN1Q5T089 497 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 GPRIN1Q7Z2K8 1008 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 TMEM132CQ8N3T6 1108 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ACTRT2Q8TDY3 377 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 TRNAU1APQ9NX07 287 aaKnown RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 LEF1Q9UJU2 399 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ANAPC2Q9UJX6 822 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 CCDC162PA2VCL2 907 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ENPP3O14638 875 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 IRF9Q00978 393 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 EPS8Q12929 822 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 UBXN2BQ14CS0 331 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 CCDC85BQ15834 202 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 TIGD2Q4W5G0 525 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 EGFLAMQ63HQ2 1017 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 GK5Q6ZS86 529 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF655Q8N720 491 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ITFG1Q8TB96 612 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ABCG4Q9H172 646 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PHPT1Q9NRX4 125 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 SOHLH2Q9NX45 425 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PCDHB1Q9Y5F3 818 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 MYO5AQ9Y4I1 1855 aaKnown RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 NEMP2A6NFY4 417 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 RNASEH2AO75792 299 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 SPAM1P38567 509 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CCR3P51677 355 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CACNG1Q06432 222 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ELP6Q0PNE2 266 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 SIX1Q15475 284 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 UBE2R2Q712K3 238 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ZBTB8BQ8NAP8 495 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 OR10T2Q8NGX3 314 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 USP29Q9HBJ7 922 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CAP1Q01518 475 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 DLG1Q12959 904 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ACAP2Q15057 778 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 XKR6Q5GH73 641 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 PAGE2BQ5JRK9 111 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 TTC23Q5W5X9 447 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MSANTD2Q6P1R3 559 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 RNF19BQ6ZMZ0 732 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ARHGAP36Q6ZRI8 547 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 C14orf80Q86SX3 495 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 HEATR4Q86WZ0 1026 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 C8orf59Q8N0T1 100 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MAGEE2Q8TD90 523 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ESAMQ96AP7 390 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ZFYVE19Q96K21 471 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 PNPLA8Q9NP80 782 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 EXOSC4Q9NPD3 245 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 C8orf4Q9NR00 106 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 COQ6Q9Y2Z9 468 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MBLAC1A4D2B0 266 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 SLC35G4P0C7Q5 338 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 SOX6P35712 828 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 DGKGP49619 791 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 SLC7A2P52569 658 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 LSAMPQ13449 338 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 TSNQ15631 228 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 C11orf91Q3C1V1 193 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 PDCD4Q53EL6 469 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 HLA-DQA1Q5Y7H0 255 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CRTC3Q6UUV7 619 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CPNE9Q8IYJ1 553 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 FBXO30Q8TB52 745 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 RAD9AQ99638 391 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CEP44Q9C0F1 390 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 POLMQ9NP87 494 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 TLR9Q9NR96 1032 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ABCB8Q9NUT2 735 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 SLC2A6Q9UGQ3 507 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 TMCC3Q9ULS5 477 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ERVW-1Q9UQF0 538 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MYH15Q9Y2K3 1946 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms