RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MRGPREQ86SM8 312 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 TRIM74Q86UV6 250 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 GALNT13Q8IUC8 556 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 CEP97Q8IW35 865 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 GALNT16Q8N428 558 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 PPP4R1Q8TF05 950 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 CHTF18Q8WVB6 975 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 TM9SF4Q92544 642 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 RSC1A1Q92681 617 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 LRFN5Q96NI6 719 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 TREX2Q9BQ50 279 aaPredicted RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 PDFQ9HBH1 243 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 SEMA3GQ9NS98 782 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 OR12D3Q9UGF7 316 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 MTMR6Q9Y217 621 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 RTTNQ86VV8 2226 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 FN1P02751 2386 aaKnown RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 NBEAL1Q6ZS30 2694 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 TMEM229AB2RXF0 380 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 MASP2O00187 686 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 CCL21O00585 134 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 DNAJC6O75061 913 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 LRIG2O94898 1065 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 HEXIM1O94992 359 aaKnown RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 YEATS4O95619 227 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 FOSL1P15407 271 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 AGAP20933 346 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 TNFAIP3P21580 790 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 LHCGRP22888 699 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 SERPINA4P29622 427 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 RORAP35398 523 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 FLT3P36888 993 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 PBX1P40424 430 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 CAPZBP47756 277 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 CSNK1DP48730 415 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 IST1P53990 364 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 SOX8P57073 446 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 PPP1CAP62136 330 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 DPTQ07507 201 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 HIF1AQ16665 826 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 RAB6CQ53S08 254 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 RWDD4Q6NW29 188 aaKnown RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 FIGNL1Q6PIW4 674 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 IGFL2Q6UWQ7 119 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 ADAMTSL4Q6UY14 1074 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 SLCO4C1Q6ZQN7 724 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 FAM92BQ6ZTR7 304 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 Q6ZVL8 140 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 PHLDB2Q86SQ0 1253 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 SRLQ86TD4 932 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 PASD1Q8IV76 773 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 DSELQ8IZU8 1212 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 SIDT2Q8NBJ9 832 aaKnown RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 C1orf131Q8NDD1 294 aaKnown RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 MTFMTQ96DP5 389 aaKnown RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 COX14Q96I36 57 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 ZNF514Q96K75 400 aaPredicted RBP8.1□□□□□ -1.11
XRN1-212ENST00000486211 PLEKHG4BQ96PX9 1271 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 FOXC2Q99958 501 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 ENKD1Q9H0I2 346 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 RAB6CQ9H0N0 254 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 ATP13A3Q9H7F0 1226 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 OLAHQ9NV23 265 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 TMEM51Q9NW97 253 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 KCTD5Q9NXV2 234 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 EPHA6Q9UF33 1036 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 KCNK6Q9Y257 313 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 PRKAB1Q9Y478 270 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 CACNA1CQ13936 2221 aa8.1□□□□□ -1.11
XRN1-212ENST00000486211 COL6A5A8TX70 2615 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 TRGV8A0A0C4DH27 118 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 TRIM49BA6NDI0 452 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 GOLGA6CA6NDK9 693 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 GOLGA6BA6NDN3 693 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 A6NJY4 79 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 OR5K4A6NMS3 321 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 BECN2A8MW95 431 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 SNX2O60749 519 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 SCRG1O75711 98 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 JCHAINP01591 159 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 MYL1P05976 194 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 EBLN1P0CF75 366 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 GOLGA6DP0CG33 693 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 SLC2A4P14672 509 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 AMD1P17707 334 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 DNAJA1P31689 397 aaKnown RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 CA7P43166 264 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 CDC16Q13042 620 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 ZNF169Q14929 603 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 ASIC2Q16515 512 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 PRAMEF17Q5VTA0 474 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 B3GNTL1Q67FW5 361 aaPredicted RBP8.09□□□□□ -1.11
XRN1-212ENST00000486211 FCRL6Q6DN72 434 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 MTFR2Q6P444 385 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 RFLNAQ6ZTI6 216 aa8.09□□□□□ -1.11
XRN1-212ENST00000486211 CHST15Q7LFX5 561 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms