RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 NPY2RP49146 381 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 VPS41P49754 854 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CLCNKAP51800 687 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
HMG20B-211ENST00000486028 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMG20B-211ENST00000486028 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CCDC38Q502W7 563 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 SNX20Q7Z614 316 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-211ENST00000486028 TRAPPC5Q8IUR0 188 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 RASGEF1AQ8N9B8 481 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 WDR48Q8TAF3 677 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 HEXDCQ8WVB3 486 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CCDC74AQ96AQ1 378 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 DCUN1D1Q96GG9 259 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CDKN2AIPNLQ96HQ2 116 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 ZNF514Q96K75 400 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-211ENST00000486028 RANBP9Q96S59 729 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CCDC3Q9BQI4 270 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 LRIT1Q9P2V4 623 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 TBC1D29Q9UFV1 150 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CRLS1Q9UJA2 301 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 CLCA2Q9UQC9 943 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 KCNK6Q9Y257 313 aa12.28□□□□□ -0.44
HMG20B-211ENST00000486028 ARHGEF17Q96PE2 2063 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-211ENST00000486028 AGAP14A8MT82 685 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 CCL22O00626 93 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 GPR39O43194 453 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 SNX2O60749 519 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 KCNJ13O60928 360 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 TPSB2P20231 275 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 MC4RP32245 332 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 PAFAH1B1P43034 410 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 MAZP56270 477 aaKnown RBP12.27□□□□□ -0.45
HMG20B-211ENST00000486028 SESN2P58004 480 aaPredicted RBP12.27□□□□□ -0.45
HMG20B-211ENST00000486028 CACNG1Q06432 222 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 TARDBPQ13148 414 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMG20B-211ENST00000486028 TPSAB1Q15661 275 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 INSCQ1MX18 579 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 ZRANB3Q5FWF4 1079 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 TSTD2Q5T7W7 516 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 CDCP2Q5VXM1 449 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 TAS2R42Q7RTR8 314 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 CREG2Q8IUH2 290 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 ZNF547Q8IVP9 402 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 SFTPA2Q8IWL1 248 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 NXPE1Q8N323 547 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 ARL14Q8N4G2 192 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 DCBLD1Q8N8Z6 715 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 Q8N9G6 341 aaPredicted RBP12.27□□□□□ -0.45
HMG20B-211ENST00000486028 PPHLN1Q8NEY8 458 aaKnown RBP12.27□□□□□ -0.45
HMG20B-211ENST00000486028 CAPZA3Q96KX2 299 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 DEPDC7Q96QD5 511 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 COPS8Q99627 209 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 OSGEPL1Q9H4B0 414 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 FAM96AQ9H5X1 160 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 BFARQ9NZS9 450 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 SLC23A2Q9UGH3 650 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 RIMKLBQ9ULI2 386 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 DNMT3AQ9Y6K1 912 aaPredicted RBP12.27□□□□□ -0.45
HMG20B-211ENST00000486028 RNF215Q9Y6U7 377 aa12.27□□□□□ -0.45
HMG20B-211ENST00000486028 RP1P56715 2156 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 TRBV23OR9-2A0A075B6M9 112 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CCDC78A2IDD5 438 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 OR5K4A6NMS3 321 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CFAP99D6REC4 459 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 MAP3K7O43318 606 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 TCEA3O75764 348 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 POP7O75817 140 aaKnown RBP12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CASQ1P31415 396 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CA5AP35218 305 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 MAGEA6P43360 314 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 GPR3P46089 330 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CLDN6P56747 220 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CCL7P80098 99 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 PPP1R7Q15435 360 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 PLA2G4EQ3MJ16 856 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 PCID2Q5JVF3 399 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 LRRC8BQ6P9F7 803 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 IYDQ6PHW0 289 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 TMEM220Q6QAJ8 160 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 RBM44Q6ZP01 1051 aaKnown RBP12.26□□□□□ -0.45
HMG20B-211ENST00000486028 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 MARCH9Q86YJ5 346 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 CCNJLQ8IV13 435 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 NAGSQ8N159 534 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
HMG20B-211ENST00000486028 SFRP1Q8N474 314 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 PATE1Q8WXA2 126 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 PEX13Q92968 403 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 HDAC10Q969S8 669 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 IL22Q9GZX6 179 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 SYNDIG1Q9H7V2 258 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 ZDHHC3Q9NYG2 299 aa12.26□□□□□ -0.45
HMG20B-211ENST00000486028 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms