RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZSWIM1Q9BR11 485 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 APOOQ9BUR5 198 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 TRIM55Q9BYV6 548 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 ACBD3Q9H3P7 528 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 DPEP2Q9H4A9 486 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 FGF22Q9HCT0 170 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 RAB20Q9NX57 234 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 LUZP4Q9P127 313 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 RCOR3Q9P2K3 495 aaPredicted RBP6.59□□□□□ -1.35
SMC4-217ENST00000485867 PHTF1Q9UMS5 762 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 OR1A2Q9Y585 309 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 HS3ST4Q9Y661 456 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 RPS6KL1Q9Y6S9 549 aa6.59□□□□□ -1.35
SMC4-217ENST00000485867 IGHV1OR21-1A0A087WYE8 117 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 DIAPH2O60879 1101 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ZMPSTE24O75844 475 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CBX6O95503 412 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ADCY5O95622 1261 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 SLC2A3P11169 496 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 KRT13P13646 458 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 GKP32189 559 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CCR1P32246 355 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 DLSTP36957 453 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 GPR3P46089 330 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 RPL34P49207 117 aaKnown RBP6.58□□□□□ -1.36
SMC4-217ENST00000485867 MXI1P50539 228 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 STK4Q13043 487 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 SQSTM1Q13501 440 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 SEMA5AQ13591 1074 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CUL2Q13617 745 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 SLC39A14Q15043 492 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CNGA2Q16280 664 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ALFQ53S48 1182 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ZRANB3Q5FWF4 1079 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 NKAIN2Q5VXU1 208 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CEACAM20Q6UY09 585 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 XYLT1Q86Y38 959 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CCDC103Q8IW40 242 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ESX1Q8N693 406 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 IQUBQ8NA54 791 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 OR6K2Q8NGY2 324 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ATL2Q8NHH9 583 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CXorf40AQ8TE69 158 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ANAPC16Q96DE5 110 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 LURAP1Q96LR2 239 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 DPYSL5Q9BPU6 564 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ZPBPQ9BS86 351 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 WRAP53Q9BUR4 548 aaKnown RBP6.58□□□□□ -1.36
SMC4-217ENST00000485867 TRIM62Q9BVG3 475 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 TM6SF2Q9BZW4 377 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 TMEM168Q9H0V1 697 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 FAM204AQ9H8W3 233 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 MAGEF1Q9HAY2 307 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 POPDC2Q9HBU9 364 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 APMAPQ9HDC9 416 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 MLXIPLQ9NP71 852 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 MRPL40Q9NQ50 206 aaKnown RBP6.58□□□□□ -1.36
SMC4-217ENST00000485867 DDIT4Q9NX09 232 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 RRN3Q9NYV6 651 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 HECAQ9UBI9 543 aaPredicted RBP6.58□□□□□ -1.36
SMC4-217ENST00000485867 CROTQ9UKG9 612 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 ITGB1BP2Q9UKP3 347 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 KIAA1257Q9ULG3 409 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 SMC3Q9UQE7 1217 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 TRAF3IP3Q9Y228 551 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 MYRFQ9Y2G1 1151 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 COQ6Q9Y2Z9 468 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 CNTRLQ7Z7A1 2325 aa6.58□□□□□ -1.36
SMC4-217ENST00000485867 SYNJ2BP-COX16A0A087WUM0 186 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 TMEM202A6NGA9 273 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 ZW10O43264 779 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 KRT86O43790 486 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 KLRC4O43908 158 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 CALCAP01258 141 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PCCBP05166 539 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 UGT2B4P06133 528 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PAEPP09466 180 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 NR2F2P24468 414 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 FPR2P25090 351 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 MAN1A1P33908 653 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 ITGA1P56199 1179 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 KIAA1024LP59773 190 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 YWHAEP62258 255 aaKnown RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 ARF5P84085 180 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 MTM1Q13496 603 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 CUL4BQ13620 913 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 TESK1Q15569 626 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PAPD7Q5XG87 772 aaKnown RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 CPZQ66K79 652 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 SP5Q6BEB4 398 aaPredicted RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 RETSATQ6NUM9 610 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 JMJD6Q6NYC1 403 aaPredicted RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 TMEM71Q6P5X7 295 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 CD300LDQ6UXZ3 194 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 TFAP2DQ7Z6R9 452 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 SETD3Q86TU7 594 aaPredicted RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 TTC7BQ86TV6 843 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 ZNF683Q8IZ20 524 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms