RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 KIR2DS5A0A0G2JLQ3 304 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 A0A0G2JNG1 304 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 OR2AG2A6NM03 316 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 D6RAR5 112 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 KIR2DS3K7RE56 304 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 CHUKO15111 745 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 PPM1DO15297 605 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 GPR39O43194 453 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 B4GAT1O43505 415 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 BRINP1O60477 761 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 POP7O75817 140 aaKnown RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 F3P13726 295 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 MC4RP32245 332 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 RPL22P35268 128 aaKnown RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 HALP42357 657 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 MAPK9P45984 424 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 CLCNKAP51800 687 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF140P52738 457 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 TERF1P54274 439 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 B4GALNT1Q00973 533 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 KIR2DS5Q14953 304 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 SIX1Q15475 284 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 AMZ2Q86W34 360 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 C17orf82Q86X59 251 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF761Q86XN6 746 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 PROSER1Q86XN7 944 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 KLHDC8BQ8IXV7 354 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 AVL9Q8NBF6 648 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 OR10G6Q8NH81 332 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 WDR36Q8NI36 951 aaKnown RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 MS4A14Q96JA4 679 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 TIMM29Q9BSF4 260 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 POLR1BQ9H9Y6 1135 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-205ENST00000485746 DKK4Q9UBT3 224 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 SLC23A2Q9UGH3 650 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 RAXQ9Y2V3 346 aa12.33□□□□□ -0.44
PTCD1-205ENST00000485746 CCDC187A0A096LP49 1063 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 HEATR9A2RTY3 570 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 CCL22O00626 93 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 GAPDHSO14556 408 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 LDB2O43679 373 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 KCNJ13O60928 360 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 EML2O95834 649 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 VIPP01282 170 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 JMJD7P0C870 316 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 RPL10P27635 214 aaKnown RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 LSSP48449 732 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SEMA5AQ13591 1074 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 TRIP13Q15645 432 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 CCDC38Q502W7 563 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 FNBP1LQ5T0N5 605 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 NKAIN2Q5VXU1 208 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SNX20Q7Z614 316 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SFRP1Q8N474 314 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 FBXO39Q8N4B4 442 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 RASGEF1AQ8N9B8 481 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 HEXDCQ8WVB3 486 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 CXorf40BQ96DE9 158 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SGF29Q96ES7 293 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 COPS8Q99627 209 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 AP1M1Q9BXS5 423 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SARS2Q9NP81 518 aaKnown RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 SMOXQ9NWM0 555 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 CPNE7Q9UBL6 633 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 FAM8A1Q9UBU6 413 aa12.32□□□□□ -0.44
PTCD1-205ENST00000485746 DNMT3AQ9Y6K1 912 aaPredicted RBP12.32□□□□□ -0.44
PTCD1-205ENST00000485746 GOLGA6L10A0A0M3HER8 536 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 AP3B1O00203 1094 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 PGRMC1O00264 195 aaKnown RBP12.31□□□□□ -0.44
PTCD1-205ENST00000485746 TAF4O00268 1085 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 RRP8O43159 456 aaKnown RBP12.31□□□□□ -0.44
PTCD1-205ENST00000485746 DUX1O43812 170 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 SUN1O94901 812 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 TNFSF15O95150 251 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 CPNE6O95741 557 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 CD1CP29017 333 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 CA5AP35218 305 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 FASLGP48023 281 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 VPS41P49754 854 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 CTSCP53634 463 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 DRG2P55039 364 aaKnown RBP12.31□□□□□ -0.44
PTCD1-205ENST00000485746 GPLD1P80108 840 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 XIAPP98170 497 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 CACNG1Q06432 222 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 MSLNQ13421 630 aaPredicted RBP12.31□□□□□ -0.44
PTCD1-205ENST00000485746 GPR33Q49SQ1 333 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF449Q6P9G9 518 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms