RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 HES3Q5TGS1 186 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 PAPD7Q5XG87 772 aaKnown RBP7.72□□□□□ -1.17
MACF1-220ENST00000485063 KCTD16Q68DU8 428 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 GUSBP11Q6P575 273 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 CRTC3Q6UUV7 619 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 TAS2R42Q7RTR8 314 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 SNX20Q7Z614 316 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 TRAPPC5Q8IUR0 188 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 GLIS1Q8NBF1 620 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 AVL9Q8NBF6 648 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 KYQ8NBH2 561 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 DDHD1Q8NEL9 900 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 GPR156Q8NFN8 814 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 TRIM44Q96DX7 344 aaPredicted RBP7.72□□□□□ -1.17
MACF1-220ENST00000485063 DNAJC1Q96KC8 554 aaKnown RBP7.72□□□□□ -1.17
MACF1-220ENST00000485063 CAPZA3Q96KX2 299 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 DEPDC7Q96QD5 511 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 RANBP9Q96S59 729 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 CCDC3Q9BQI4 270 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 UGT1A7Q9HAW7 530 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 UGT1A10Q9HAW8 530 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 UGT1A8Q9HAW9 530 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 CASS4Q9NQ75 786 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 KCND1Q9NSA2 647 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 KLC4Q9NSK0 619 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 SPATS2LQ9NUQ6 558 aaKnown RBP7.72□□□□□ -1.17
MACF1-220ENST00000485063 PIH1D1Q9NWS0 290 aaKnown RBP7.72□□□□□ -1.17
MACF1-220ENST00000485063 BFARQ9NZS9 450 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 LRIT1Q9P2V4 623 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 KLK13Q9UKR3 277 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 CLCA2Q9UQC9 943 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 KCNK6Q9Y257 313 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 PRKAB1Q9Y478 270 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 KCTD3Q9Y597 815 aa7.72□□□□□ -1.17
MACF1-220ENST00000485063 DNMT3AQ9Y6K1 912 aaPredicted RBP7.72□□□□□ -1.17
MACF1-220ENST00000485063 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.17
MACF1-220ENST00000485063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 LY6G6EA0A0G2JKS1 128 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 FAM221BA6H8Z2 402 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 KLHL33A6NCF5 533 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CCDC188H7C350 402 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 OPA1O60313 960 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 NOBOXO60393 691 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SNX2O60749 519 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 MTX2O75431 263 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 TCEA3O75764 348 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 TOP3BO95985 862 aaKnown RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 MT-CO3P00414 261 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ZNF7P17097 686 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 IDSP22304 550 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 HALP42357 657 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CLCNKAP51800 687 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ZNF140P52738 457 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 TERF1P54274 439 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SESN2P58004 480 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 XIAPP98170 497 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 INSM1Q01101 510 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 CACNG1Q06432 222 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SPIDRQ14159 915 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 HLTFQ14527 1009 aaKnown RBP eCLIP7.71□□□□□ -1.18
MACF1-220ENST00000485063 PLA2G4EQ3MJ16 856 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CCDC38Q502W7 563 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CERCAMQ5T4B2 595 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 LYPLAL1Q5VWZ2 237 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 TTC27Q6P3X3 843 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 LRRC8BQ6P9F7 803 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ZNF449Q6P9G9 518 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 TMEM220Q6QAJ8 160 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 RBM44Q6ZP01 1051 aaKnown RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 PCGF5Q86SE9 256 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SLC9B2Q86UD5 537 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 AMZ2Q86W34 360 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 NRROSQ86YC3 692 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 TRIM48Q8IWZ4 208 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CACTIN-AS1Q8N1I8 211 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 PEX13Q92968 403 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CCDC74AQ96AQ1 378 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SH3KBP1Q96B97 665 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 CDKN2AIPNLQ96HQ2 116 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 GFM1Q96RP9 751 aaKnown RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 COPS8Q99627 209 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 TIMM29Q9BSF4 260 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 IL22Q9GZX6 179 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 VPS37BQ9H9H4 285 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ZDHHC3Q9NYG2 299 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SMARCAL1Q9NZC9 954 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 SAMD15Q9P1V8 674 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ASIC3Q9UHC3 531 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 RIMKLBQ9ULI2 386 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 DNAJC16Q9Y2G8 782 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 U3KQA8 63 aa7.71□□□□□ -1.18
MACF1-220ENST00000485063 ARHGEF17Q96PE2 2063 aaPredicted RBP7.71□□□□□ -1.18
MACF1-220ENST00000485063 KIR2DS5A0A0G2JLQ3 304 aa7.7□□□□□ -1.18
MACF1-220ENST00000485063 A0A0G2JNG1 304 aa7.7□□□□□ -1.18
MACF1-220ENST00000485063 CCDC78A2IDD5 438 aa7.7□□□□□ -1.18
MACF1-220ENST00000485063 FAM149AA5PLN7 773 aa7.7□□□□□ -1.18
MACF1-220ENST00000485063 MROH6A6NGR9 719 aa7.7□□□□□ -1.18
MACF1-220ENST00000485063 OR2AG2A6NM03 316 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms