RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF624Q9P2J8 865 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 VIPP01282 170 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 PIRTP0C851 137 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 SLC19A1P41440 591 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 CDKN2BP42772 138 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 PPM1FP49593 454 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 PCSK7Q16549 785 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 SKOR2Q2VWA4 1001 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 KDELC1Q6UW63 502 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 TIPARPQ7Z3E1 657 aaKnown RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 SPATA22Q8NHS9 363 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 KIAA1143Q96AT1 154 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-206ENST00000484733 RAB33BQ9H082 229 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 FAM153AQ9UHL3 310 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 TMPRSS11EQ9UL52 423 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 SPO11Q9Y5K1 396 aa11.29□□□□□ -0.6
SCFD1-206ENST00000484733 POLR1CO15160 346 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-206ENST00000484733 PSTPIP1O43586 416 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 UBXN7O94888 489 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 MT-CYBP00156 380 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-206ENST00000484733 CD68P34810 354 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-206ENST00000484733 HMGCLP35914 325 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 MC1RQ01726 317 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 INSCQ1MX18 579 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 ODF2Q5BJF6 829 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 PRICKLE2Q7Z3G6 844 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 KDELC2Q7Z4H8 507 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF547Q8IVP9 402 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 TTC30BQ8N4P2 665 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 TFB1MQ8WVM0 346 aaKnown RBP11.28□□□□□ -0.6
SCFD1-206ENST00000484733 VAT1Q99536 393 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 ARFGAP3Q9NP61 516 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 HACD3Q9P035 362 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 EPHA6Q9UF33 1036 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
SCFD1-206ENST00000484733 DNMT3AQ9Y6K1 912 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF106Q9H2Y7 1883 aaKnown RBP11.28□□□□□ -0.6
SCFD1-206ENST00000484733 LOC101059948A0A1B0GTJ6 334 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 STK17BO94768 372 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 CDK14O94921 469 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 COMTP21964 271 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 IDSP22304 550 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 MAPK9P45984 424 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 NOP2P46087 812 aaKnown RBP11.27□□□□□ -0.6
SCFD1-206ENST00000484733 CCR10P46092 362 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 WASHC5Q12768 1159 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 KCNAB2Q13303 367 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 CRTC3Q6UUV7 619 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 PRSS42Q7Z5A4 293 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 C11orf96Q7Z7L8 435 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 ESX1Q8N693 406 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 FCRL5Q96RD9 977 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 CTRCQ99895 268 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 OSGEPL1Q9H4B0 414 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF768Q9H5H4 540 aaKnown RBP11.27□□□□□ -0.6
SCFD1-206ENST00000484733 GPN2Q9H9Y4 310 aaPredicted RBP11.27□□□□□ -0.6
SCFD1-206ENST00000484733 APMAPQ9HDC9 416 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 SEMA5BQ9P283 1151 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 SLC30A1Q9Y6M5 507 aa11.27□□□□□ -0.6
SCFD1-206ENST00000484733 GOLGA6L3A6NEY3 463 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 AURKAO14965 403 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 BRAFP15056 766 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 VCLP18206 1134 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 POLE2P56282 527 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 DMPKQ09013 629 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 TMEM115Q12893 351 aaPredicted RBP11.27□□□□□ -0.61
SCFD1-206ENST00000484733 ATP13A5Q4VNC0 1218 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.61
SCFD1-206ENST00000484733 SPOCD1Q6ZMY3 1216 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 CNGA4Q8IV77 575 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 KLHL6Q8WZ60 621 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.61
SCFD1-206ENST00000484733 HACD1B0YJ81 288 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 SPOPO43791 374 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 CST8O60676 142 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 PMPCBO75439 489 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 AMD1P17707 334 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 STAT5AP42229 794 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 GFERP55789 205 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 WNT3AP56704 352 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 DYNLT1P63172 113 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 CDC20Q12834 499 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 TBX2Q13207 712 aaPredicted RBP11.26□□□□□ -0.61
SCFD1-206ENST00000484733 GTF2H3Q13889 308 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 IL11RAQ14626 422 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 RCOR2Q8IZ40 523 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 IL17CQ9P0M4 197 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 PDZK1P1A8MUH7 402 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 NKX2-8O15522 239 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 NFKB1P19838 968 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 HLA-DPA1P20036 260 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 SPAM1P38567 509 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 MPP3Q13368 585 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 PLA2G4EQ3MJ16 856 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 SIRPB2Q5JXA9 342 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 LDLRAP1Q5SW96 308 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms