RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CLDN7O95471 211 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 CPNE6O95741 557 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 FGGP02679 453 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 GPR89BP0CG08 455 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 MPSTP25325 297 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 GPR1P46091 355 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 PPM1FP49593 454 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-213ENST00000484112 POLE2P56282 527 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 CDK3Q00526 305 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 GALNT3Q14435 633 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 HENMT1Q5T8I9 393 aaKnown RBP9.9□□□□□ -0.82
CPSF4-213ENST00000484112 RAET1GQ6H3X3 334 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 B4GALNT4Q76KP1 1039 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 LINC00523Q86TU6 105 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 RASGEF1CQ8N431 466 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 FAM71DQ8N9W8 422 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 IPMKQ8NFU5 416 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 ZDHHC1Q8WTX9 485 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 NKD1Q969G9 470 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 PMEPA1Q969W9 287 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 OXNAD1Q96HP4 312 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-213ENST00000484112 CCDC74BQ96LY2 380 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 TAAR9Q96RI9 348 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 NUDT22Q9BRQ3 303 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 LGR4Q9BXB1 951 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 SLC12A9Q9BXP2 914 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 GPR63Q9BZJ6 419 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 EPN3Q9H201 632 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 ABCG8Q9H221 673 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 FAM83DQ9H4H8 585 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 LRRC40Q9H9A6 602 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 RMI1Q9H9A7 625 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 CARS2Q9HA77 564 aaKnown RBP9.9□□□□□ -0.82
CPSF4-213ENST00000484112 KCND1Q9NSA2 647 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 SPATS2LQ9NUQ6 558 aaKnown RBP9.9□□□□□ -0.82
CPSF4-213ENST00000484112 ZNF148Q9UQR1 794 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 R3HDM2Q9Y2K5 976 aaKnown RBP9.9□□□□□ -0.82
CPSF4-213ENST00000484112 ZNF711Q9Y462 761 aa9.9□□□□□ -0.82
CPSF4-213ENST00000484112 UNC13CQ8NB66 2214 aa9.9□□□□□ -0.83
CPSF4-213ENST00000484112 HECTD1Q9ULT8 2610 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 PIEZO2Q9H5I5 2752 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 IGHV5-10-1A0A0J9YXX1 117 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 TCRBV7S2A1N4TA0A589 114 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 AP3B1O00203 1094 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ZW10O43264 779 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ECEL1O95672 775 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 FGF3P11487 239 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-213ENST00000484112 LIFP15018 202 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 PSMB4P28070 264 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ADRA1AP35348 466 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 FDFT1P37268 417 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 CCR10P46092 362 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 KCNAB2Q13303 367 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 LONRF2Q1L5Z9 754 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 SIRPB2Q5JXA9 342 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ZNF569Q5MCW4 686 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 NKAIN2Q5VXU1 208 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 DENND2CQ68D51 928 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 KCTD11Q693B1 232 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 LYSMD3Q7Z3D4 306 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 HEATR4Q86WZ0 1026 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 TRAM1L1Q8N609 369 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 CCDC110Q8TBZ0 833 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ART4Q93070 314 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 SCARF2Q96GP6 870 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-213ENST00000484112 COX14Q96I36 57 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 TMEM121Q9BTD3 319 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ZMYND15Q9H091 742 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ADNPQ9H2P0 1102 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 ZNF71Q9NQZ8 489 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-213ENST00000484112 TRNAU1APQ9NX07 287 aaKnown RBP9.89□□□□□ -0.83
CPSF4-213ENST00000484112 UBP1Q9NZI7 540 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 VPS18Q9P253 973 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 PAK5Q9P286 719 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 SLC17A4Q9Y2C5 497 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 B3GALT1Q9Y5Z6 326 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 AHCTF1Q8WYP5 2266 aa9.89□□□□□ -0.83
CPSF4-213ENST00000484112 SCN8AQ9UQD0 1980 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 NAV2Q8IVL1 2488 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 PRSS38A1L453 326 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 C2orf81A6NN90 581 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 HGSO14964 777 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 CEP104O60308 925 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 CRTAMO95727 393 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 AP2A1O95782 977 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 SOD1P00441 154 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 IVLP07476 585 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 TCP1P17987 556 aaKnown RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 AK4P27144 223 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 CD1CP29017 333 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 CSTF2P33240 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 UGT1A3P35503 534 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 GNPDA1P46926 289 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 ARSDP51689 593 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 ILF3Q12906 894 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 LAMB3Q13751 1172 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 LRP8Q14114 963 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 SIX1Q15475 284 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 TAF1AQ15573 450 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms