RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SLC8A2Q9UPR5 921 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 MEI4A8MW99 385 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 SKAP2O75563 359 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-225ENST00000483495 TSPAN8P19075 237 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 NSG1P42857 185 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 NRIP1P48552 1158 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 CLCQ05315 142 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 SHHQ15465 462 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 GPRC6AQ5T6X5 926 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 KANK2Q63ZY3 851 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 ULK2Q8IYT8 1036 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 ENDOVQ8N8Q3 282 aaKnown RBP13.09□□□□□ -0.31
CPNE1-225ENST00000483495 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 LKAAEAR1Q8TD35 194 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 ULK4Q96C45 1275 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 ASB16Q96NS5 453 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 NSUN5Q96P11 429 aaKnown RBP13.09□□□□□ -0.31
CPNE1-225ENST00000483495 CATSPER2Q96P56 530 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 RNPEPL1Q9HAU8 725 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 NUDT4Q9NZJ9 180 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 DKK3Q9UBP4 350 aa13.09□□□□□ -0.31
CPNE1-225ENST00000483495 COPG1Q9Y678 874 aaKnown RBP13.09□□□□□ -0.31
CPNE1-225ENST00000483495 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
CPNE1-225ENST00000483495 A0A088AWK7 358 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 LOC100653049A0A140TA62 436 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 PPP6CO00743 305 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 AZIN1O14977 448 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 ENTPD5O75356 428 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 LEFTY1O75610 366 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 KRT34O76011 436 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SLC25A14O95258 325 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 CYP2A6P11509 494 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 VIPR2P41587 438 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SEMG2Q02383 582 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 TGFBIQ15582 683 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 TCEAL5Q5H9L2 206 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 TRIM68Q6AZZ1 485 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SBSNQ6UWP8 590 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 LARP4Q71RC2 724 aaKnown RBP eCLIP13.08□□□□□ -0.328e-24■□□□□ 9.5
CPNE1-225ENST00000483495 NET1Q7Z628 596 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 CLDN19Q8N6F1 224 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 CFAP61Q8NHU2 1237 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 TRPC4APQ8TEL6 797 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 THTPAQ9BU02 230 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 TRPV4Q9HBA0 871 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 MID1IP1Q9NPA3 183 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 OBP2AQ9NY56 170 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 PCTPQ9UKL6 214 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 FIS1Q9Y3D6 152 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 TULP3O75386 442 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 MLYCDO95822 493 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 LMNAP02545 664 aaKnown RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 CTSLP07711 333 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 ITGAXP20702 1163 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 DGKAP23743 735 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 VIPR1P32241 457 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 RGS4P49798 205 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 DCDC1P59894 354 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 PPP1R3AQ16821 1122 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 GAB4Q2WGN9 574 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 ATP13A5Q4VNC0 1218 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 RFLNAQ6ZTI6 216 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 ZBTB2Q8N680 514 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 WDR60Q8WVS4 1066 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 C19orf60Q96EN9 201 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 CDCA3Q99618 268 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 COPS8Q99627 209 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SPATS2LQ9NUQ6 558 aaKnown RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 SMOXQ9NWM0 555 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 PKD2L2Q9NZM6 624 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 NFKBIL1Q9UBC1 381 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-225ENST00000483495 IL36AQ9UHA7 158 aa13.08□□□□□ -0.32
CPNE1-225ENST00000483495 UPK3BL1B0FP48 263 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 UPK3BL2E5RIL1 263 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 SNX2O60749 519 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 NFATC1O95644 943 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
CPNE1-225ENST00000483495 CD1EP15812 388 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 TIMP2P16035 220 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 FSHRP23945 695 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 NFKBIAP25963 317 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 PBX2P40425 430 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 AGTR2P50052 363 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 ATP4BP51164 291 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 B4GALNT1Q00973 533 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 CDC16Q13042 620 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms