RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
HDLBP-239ENST00000483086 CCL22O00626 93 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SGTAO43765 313 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 F3P13726 295 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 ZNF7P17097 686 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-239ENST00000483086 HLA-DPA1P20036 260 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SLC19A1P41440 591 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 CLCNKAP51800 687 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 MAPK10P53779 464 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 XIAPP98170 497 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 HHEXQ03014 270 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SEPT7Q16181 437 aaKnown RBP11.9□□□□□ -0.5
HDLBP-239ENST00000483086 ARHGAP40Q5TG30 622 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 KCTD11Q693B1 232 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 PDPK2PQ6A1A2 396 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 DARS2Q6PI48 645 aaKnown RBP11.9□□□□□ -0.5
HDLBP-239ENST00000483086 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 GLT6D1Q7Z4J2 308 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 PIM3Q86V86 326 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 PHYKPLQ8IUZ5 450 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 RASGEF1AQ8N9B8 481 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 OR13C4Q8NGS5 318 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SLC35B2Q8TB61 432 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 ATG4AQ8WYN0 398 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 USP7Q93009 1102 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SPATA13Q96N96 652 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SARS2Q9NP81 518 aaKnown RBP11.9□□□□□ -0.5
HDLBP-239ENST00000483086 LUC7LQ9NQ29 371 aaKnown RBP11.9□□□□□ -0.5
HDLBP-239ENST00000483086 KCNK4Q9NYG8 393 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 PDP2Q9P2J9 529 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 IMPACTQ9P2X3 320 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 ACSL6Q9UKU0 697 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 PCDHGA7Q9Y5G6 932 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
HDLBP-239ENST00000483086 TENM4Q6N022 2769 aa11.9□□□□□ -0.51
HDLBP-239ENST00000483086 SNRNP200O75643 2136 aaKnown RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 OR52A4PA6NMU1 304 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 CDK14O94921 469 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 PRSS56P0CW18 603 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 RPL10P27635 214 aaKnown RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 SPAM1P38567 509 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 DRG2P55039 364 aaKnown RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 GFERP55789 205 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 TMEM115Q12893 351 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 EIF3IQ13347 325 aaKnown RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 PEX6Q13608 980 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 GPRC6AQ5T6X5 926 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 PRUNE1Q86TP1 453 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 LRRTM4Q86VH4 590 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 JAMLQ86YT9 394 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 CDKL3Q8IVW4 592 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 TAB3Q8N5C8 712 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 BMPERQ8N8U9 685 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 FAM71DQ8N9W8 422 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 OR4D9Q8NGE8 314 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 GPR150Q8NGU9 434 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 RNF31Q96EP0 1072 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 STRADBQ9C0K7 418 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 OSGEPL1Q9H4B0 414 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 TRABDQ9H4I3 376 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 PIH1D1Q9NWS0 290 aaKnown RBP11.89□□□□□ -0.51
HDLBP-239ENST00000483086 CPNE7Q9UBL6 633 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 FKBPLQ9UIM3 349 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 ZNF462Q96JM2 2506 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 SPTBP11277 2137 aa11.89□□□□□ -0.51
HDLBP-239ENST00000483086 GLYATL1P3A0A0U1RQE8 302 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 C5orf60A6NFR6 353 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 NVLO15381 856 aaKnown RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 LDB2O43679 373 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 VEGFDO43915 354 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 IPO7O95373 1038 aaKnown RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 JMJD7P0C870 316 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 CDKN1CP49918 316 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 ZNF140P52738 457 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 GEMP55040 296 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 INSCQ1MX18 579 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 KIAA1614Q5VZ46 1190 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 TMEM71Q6P5X7 295 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 GPR155Q7Z3F1 870 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 VASH2Q86V25 355 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 LILRA3Q8N6C8 439 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 GLIS1Q8NBF1 620 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 DDHD1Q8NEL9 900 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 OR4K2Q8NGD2 314 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 DTX3LQ8TDB6 740 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 SNRNP27Q8WVK2 155 aaKnown RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 JPH3Q8WXH2 748 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 CALR3Q96L12 384 aaKnown RBP11.88□□□□□ -0.51
HDLBP-239ENST00000483086 SLC38A3Q99624 504 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 TIMM29Q9BSF4 260 aa11.88□□□□□ -0.51
HDLBP-239ENST00000483086 TMEM121Q9BTD3 319 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms