RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 FAM129CQ86XR2 697 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 IL22RA1Q8N6P7 574 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 TC2NQ8N9U0 490 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 RNF214Q8ND24 703 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 SPATA22Q8NHS9 363 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 HTR3CQ8WXA8 447 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 PPP1R2P1Q96PQ5 205 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 QKIQ96PU8 341 aaKnown RBP eCLIP11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 C19orf43Q9BQ61 176 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 ARHGAP9Q9BRR9 750 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 SEMA4CQ9C0C4 833 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 OSGEPL1Q9H4B0 414 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 SMOXQ9NWM0 555 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 TMEM9Q9P0T7 183 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 KLHL8Q9P2G9 620 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 PRKAB1Q9Y478 270 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 J3QKU1 62 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 SNX2O60749 519 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PMPCBO75439 489 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 VIPP01282 170 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC4A1P02730 911 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PIRTP0C851 137 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 TNNT1P13805 278 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PECAM1P16284 738 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 NFKB1P19838 968 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 IDSP22304 550 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 MAP4P27816 1152 aaKnown RBP11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PTPN7P35236 360 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 SPAM1P38567 509 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 ARSDP51689 593 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 WNT3AP56704 352 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 DMPKQ09013 629 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 MAP7Q14244 749 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC1A5Q15758 541 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 KAZNQ674X7 775 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 KDELC2Q7Z4H8 507 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 GLT6D1Q7Z4J2 308 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF761Q86XN6 746 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 TRIM48Q8IWZ4 208 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 DDHD1Q8NEL9 900 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 NCSTNQ92542 709 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 RTP4Q96DX8 246 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF514Q96K75 400 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 MRGPRX2Q96LB1 330 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 TTC25Q96NG3 672 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 CATSPER2Q96P56 530 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 FSD1LQ9BXM9 530 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 TRIM5Q9C035 493 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 RAB33BQ9H082 229 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 ADNPQ9H2P0 1102 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PRDM8Q9NQV8 689 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 OCIAD1Q9NX40 245 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 PKP3Q9Y446 797 aa11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 TMEM184BQ9Y519 407 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 DNMT3AQ9Y6K1 912 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-207ENST00000481335 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 TRBV23OR9-2A0A075B6M9 112 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 PDZK1P1A8MUH7 402 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 RAD1O60671 282 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ANXA9O76027 345 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 UBXN7O94888 489 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 CTNNA1P35221 906 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 HALP42357 657 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 GEMP55040 296 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 TMEM115Q12893 351 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 NOMO1Q15155 1222 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 LINC00303Q3SY05 128 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ATP13A5Q4VNC0 1218 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 CRTC2Q53ET0 693 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 SIRPB2Q5JXA9 342 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ANKS6Q68DC2 871 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ITPRIPL1Q6GPH6 555 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 CRTC3Q6UUV7 619 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 PID1Q7Z2X4 250 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 C11orf96Q7Z7L8 435 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 DAAM2Q86T65 1068 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 VASH2Q86V25 355 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ZC3H18Q86VM9 953 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 TRAPPC5Q8IUR0 188 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 CCDC50Q8IVM0 306 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF547Q8IVP9 402 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 CACNA2D3Q8IZS8 1091 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 NLGN4XQ8N0W4 816 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF567Q8N184 647 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 TTC30BQ8N4P2 665 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 NLGN4YQ8NFZ3 816 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 KIAA1143Q96AT1 154 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 HAUS1Q96CS2 278 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC45A3Q96JT2 553 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 PANX2Q96RD6 677 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC12A9Q9BXP2 914 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 GBA3Q9H227 469 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 IL17CQ9P0M4 197 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 SAE1Q9UBE0 346 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 EPHA6Q9UF33 1036 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 TUBD1Q9UJT1 453 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms