RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	TFAP2A	P05549	437 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	UBL4A	P11441	157 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	GNB3	P16520	340 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF26	P17031	533 aa	Predicted RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	MCC	P23508	829 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	HOXC8	P31273	242 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	RARS	P54136	660 aa	Known RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	MLLT10	P55197	1068 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	IRX6	P78412	446 aa	Predicted RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	CEBPZ	Q03701	1054 aa	Known RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	SPOCK1	Q08629	439 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	PDE1C	Q14123	709 aa	Predicted RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	TMEM187	Q14656	261 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	KIR2DS3	Q14952	304 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	PNLIPRP3	Q17RR3	467 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	LCN10	Q6JVE6	187 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF790	Q6PG37	636 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173		Q75L30	129 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	LONP2	Q86WA8	852 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	RASGEF1C	Q8N431	466 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	OR1J2	Q8NGS2	313 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	HCAR2	Q8TDS4	363 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZUFSP	Q96AP4	578 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	ABHD8	Q96I13	439 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	PRMT6	Q96LA8	375 aa	Predicted RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	RAD21L1	Q9H4I0	556 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	SCPEP1	Q9HB40	452 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	RANGRF	Q9HD47	186 aa	Predicted RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	DLGAP2	Q9P1A6	1054 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	R3HDM2	Q9Y2K5	976 aa	Known RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	MRPS28	Q9Y2Q9	187 aa	Known RBP	2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173	CACNA1F	O60840	1977 aa		2.97	□□□□□ -1.93
CCNL1-223	ENST00000481173		A0A0G2JNG1	304 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173		A6NL46	340 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173		H3BQ06	376 aa	Predicted RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	PAGE4	O60829	102 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	IGLV1-44	P01699	117 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	LIPF	P07098	398 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	GNAZ	P19086	355 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ARL1	P40616	181 aa	Predicted RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	KIR2DS5	Q14953	304 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ZNF805	Q5CZA5	627 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	LRIF1	Q5T3J3	769 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ACAD10	Q6JQN1	1059 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	INO80C	Q6PI98	192 aa	Predicted RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ARMC8	Q8IUR7	673 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	CPXCR1	Q8N123	301 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	PAF1	Q8N7H5	531 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	MYRIP	Q8NFW9	859 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	RDM1	Q8NG50	284 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	WDR20	Q8TBZ3	569 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	KCNG4	Q8TDN1	519 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ZNF473	Q8WTR7	871 aa	Known RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	SMARCE1	Q969G3	411 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	INTS12	Q96CB8	462 aa	Known RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	RANBP17	Q9H2T7	1088 aa	Known RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ZBTB20	Q9HC78	741 aa	Predicted RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	SLC38A7	Q9NVC3	462 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	DNAJB4	Q9UDY4	337 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	ACAD8	Q9UKU7	415 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	LRRFIP2	Q9Y608	721 aa	Known RBP	2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	PRSS21	Q9Y6M0	314 aa		2.96	□□□□□ -1.94
CCNL1-223	ENST00000481173	FLT1	P17948	1338 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173		A0A087X002	238 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	NPIPB15	A6NHN6	443 aa	Predicted RBP	2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	ANKRD66	B4E2M5	251 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	PSMD14	O00487	310 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	CLIC2	O15247	247 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	PLPP2	O43688	288 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	PDE9A	O76083	593 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	BMP10	O95393	424 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	ICAM1	P05362	532 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	SPARC	P09486	303 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	SP100	P23497	879 aa	Predicted RBP	2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	ELF1	P32519	619 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	PBX3	P40426	434 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	PRCP	P42785	496 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	CLK1	P49759	484 aa	Known RBP	2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	OLR1	P78380	273 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	IRX1	P78414	480 aa	Predicted RBP	2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	DHX8	Q14562	1220 aa	Known RBP	2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	DPCR1	Q3MIW9	517 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	SPINK14	Q6IE38	97 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	R3HCC1L	Q7Z5L2	792 aa	Known RBP	2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	SLC5A8	Q8N695	610 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	EMC1	Q8N766	993 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	OR8K5	Q8NH50	307 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	METTL6	Q8TCB7	284 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	EGLN2	Q96KS0	407 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	ART5	Q96L15	291 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	WDFY2	Q96P53	400 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	SLX1A	Q9BQ83	275 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	AGXT2	Q9BYV1	514 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	UBXN6	Q9BZV1	441 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	SIL1	Q9H173	461 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	POLR1B	Q9H9Y6	1135 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	WASH6P	Q9NQA3	447 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	ADPRHL2	Q9NX46	363 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	TAS2R10	Q9NYW0	307 aa		2.95	□□□□□ -1.94
CCNL1-223	ENST00000481173	PAK5	Q9P286	719 aa		2.95	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms