RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 GTF2H3Q13889 308 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 INSCQ1MX18 579 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 PARP6Q2NL67 630 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 P3H1Q32P28 736 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 PHF19Q5T6S3 580 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 USP53Q70EK8 1073 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 SLC9B2Q86UD5 537 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 PDZD3Q86UT5 571 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 ZNF547Q8IVP9 402 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 LRRC8AQ8IWT6 810 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 SPACA3Q8IXA5 215 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 DDHD1Q8NEL9 900 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 SH3KBP1Q96B97 665 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 C19orf43Q9BQ61 176 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 SEMA6CQ9H3T2 930 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 OSGEPL1Q9H4B0 414 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 LOXL2Q9Y4K0 774 aa16.77■□□□□ 0.28
HSPG2-209ENST00000480900 MGAQ8IWI9 3026 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 TRBV23OR9-2A0A075B6M9 112 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 HGSO14964 777 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-209ENST00000480900 SNX2O60749 519 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 CRTAMO95727 393 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 JMJD7P0C870 316 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 TLE3Q04726 772 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 MSLNQ13421 630 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-209ENST00000480900 TRA2AQ13595 282 aaKnown RBP eCLIP16.76■□□□□ 0.27
HSPG2-209ENST00000480900 PLA2G4EQ3MJ16 856 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 KCTD11Q693B1 232 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 DENND5AQ6IQ26 1287 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 TRAPPC5Q8IUR0 188 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 OR4K2Q8NGD2 314 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 OR4D9Q8NGE8 314 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 OR10G6Q8NH81 332 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 KCNE4Q8WWG9 221 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 RTP4Q96DX8 246 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 CCDC97Q96F63 343 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-209ENST00000480900 TTC25Q96NG3 672 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 SLC38A3Q99624 504 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 CMKLR1Q99788 373 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 TMEM121Q9BTD3 319 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 FRMD8P1Q9BZ68 369 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-209ENST00000480900 PRDM8Q9NQV8 689 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 SLC23A2Q9UGH3 650 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 RALYQ9UKM9 306 aaKnown RBP16.76■□□□□ 0.27
HSPG2-209ENST00000480900 PCDHGA7Q9Y5G6 932 aa16.76■□□□□ 0.27
HSPG2-209ENST00000480900 SDK2Q58EX2 2172 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 IGHV5-10-1A0A0J9YXX1 117 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 GPR39O43194 453 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 DUX1O43812 170 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A9O60656 530 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 PRAMEF1O95521 474 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 VCLP18206 1134 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A6P19224 532 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A1P22309 533 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A4P22310 534 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 CSF2RBP32927 897 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A3P35503 534 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 ZNF140P52738 457 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-209ENST00000480900 LIMK2P53671 638 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 EPHA4P54764 986 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 GDF10P55107 478 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 SPARCL1Q14515 664 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 PTPRCAPQ14761 206 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 GPRC6AQ5T6X5 926 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 MEI1Q5TIA1 1274 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 NKAIN2Q5VXU1 208 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 WASH2PQ6VEQ5 465 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 ZNF574Q6ZN55 896 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-209ENST00000480900 C11orf96Q7Z7L8 435 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 ZNF761Q86XN6 746 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-209ENST00000480900 SLC13A5Q86YT5 568 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-209ENST00000480900 ATG4AQ8WYN0 398 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-209ENST00000480900 DPH1Q9BZG8 443 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 LRRC40Q9H9A6 602 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A7Q9HAW7 530 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A10Q9HAW8 530 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 UGT1A8Q9HAW9 530 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 WASH6PQ9NQA3 447 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 AKAP7Q9P0M2 348 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-209ENST00000480900 CPNE7Q9UBL6 633 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 PISDQ9UG56 409 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 DNAJC16Q9Y2G8 782 aa16.75■□□□□ 0.27
HSPG2-209ENST00000480900 LILRA5A6NI73 299 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 PSMD3O43242 534 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 NRDCO43847 1150 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 KCNJ13O60928 360 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 METTL18O95568 372 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 HGFP14210 728 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 XRCC1P18887 633 aaPredicted RBP16.74■□□□□ 0.27
HSPG2-209ENST00000480900 SLC5A2P31639 672 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 STIP1P31948 543 aaKnown RBP16.74■□□□□ 0.27
HSPG2-209ENST00000480900 UBE2IP63279 158 aaKnown RBP16.74■□□□□ 0.27
HSPG2-209ENST00000480900 CFHR1Q03591 330 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 C16orf72Q14CZ0 275 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 RPS6KA1Q15418 735 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
HSPG2-209ENST00000480900 AGAP9Q5VTM2 703 aa16.74■□□□□ 0.27
HSPG2-209ENST00000480900 RASGEF1AQ8N9B8 481 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms