RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 NOL11Q9H8H0 719 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 FARSBQ9NSD9 589 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 GRIP1Q9Y3R0 1128 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 NPEPPSL1A6NEC2 478 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MOXD2PA6NHM9 499 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MATN2O00339 956 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SLC22A2O15244 555 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CYP4B1P13584 511 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PUS10Q3MIT2 529 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 C16orf46Q6P387 395 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 FAM13CQ8NE31 585 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 BHLHE41Q9C0J9 482 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 THUMPD1Q9NXG2 353 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 LRATO95237 230 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CMPK1P30085 196 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 POLR2JP52435 117 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CPSF6Q16630 551 aaKnown RBP eCLIP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 GLB1L3Q8NCI6 653 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SMPD3Q9NY59 655 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 STOX2Q9P2F5 926 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PCDHB9Q9Y5E1 797 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TCRBV9S1A1TA0A576 114 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ADAM8P78325 824 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 IL18R1Q13478 541 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SYVN1Q86TM6 617 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PIGZQ86VD9 579 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TTLQ8NG68 377 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TAPBPLQ9BX59 468 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PRDM12Q9H4Q4 367 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 GLOD4Q9HC38 313 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SCELO95171 688 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SERPINA3P01011 423 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF12P17014 697 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 IL12BP29460 328 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 GLUD2P49448 558 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ZBTB6Q15916 424 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SNAPC1Q16533 368 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 C9orf64Q5T6V5 341 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 AGO3Q9H9G7 860 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PLLPQ9Y342 182 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ANXA2P2A6NMY6 339 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 FABP3P05413 133 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ANXA2P07355 339 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MRPS5P82675 430 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TIGD2Q4W5G0 525 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SLITRK4Q8IW52 837 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TMEM161BQ8NDZ6 487 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MARK4Q96L34 752 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 NSMCE3Q96MG7 304 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PRICKLE1Q96MT3 831 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PCDHGB7Q9Y5F8 929 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MAPK10P53779 464 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SLC25A3Q00325 362 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 FNBP1LQ5T0N5 605 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TRNT1Q96Q11 434 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF221Q9UK13 617 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 BAIAP2Q9UQB8 552 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PCDHGB2Q9Y5G2 931 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 WASHC1A8K0Z3 465 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 WASH3PC4AMC7 463 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 C9P02748 559 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 GOT1P17174 413 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 STXBP1P61764 594 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 CDK18Q07002 472 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PERM1Q5SV97 790 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 WASH2PQ6VEQ5 465 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 FRRS1Q6ZNA5 592 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 RBM44Q6ZP01 1051 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 FSTL5Q8N475 847 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ZBTB2Q8N680 514 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ERMAPQ96PL5 475 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 NAV1Q8NEY1 1877 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 AKAP8O43823 692 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TRMUO75648 421 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 GPIP06744 558 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ARCN1P48444 511 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ATXN1P54253 815 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 DCST1Q5T197 706 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 GRPEL2Q8TAA5 225 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SHC3Q92529 594 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SMG7Q92540 1137 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TRIM17Q9Y577 477 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MATN4O95460 622 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PGRP06401 933 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF132P52740 706 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SLC34A3Q8N130 599 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SPPL2BQ8TCT7 592 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 UFD1Q92890 307 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 DIRAS2Q96HU8 199 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 IKZF2Q9UKS7 526 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 TRIM3O75382 744 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MAFO75444 373 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SASH3O75995 380 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 LAG3P18627 525 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 AVPR1BP47901 424 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MAPK12P53778 367 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 RGS8P57771 180 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 EIF5AL1Q6IS14 154 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms