RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MINDY1Q8N5J2 469 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 RASGEF1AQ8N9B8 481 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 OR56A4Q8NGH8 313 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 OR6P1Q8NGX9 317 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 MDM1Q8TC05 714 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 ADAMTS14Q8WXS8 1223 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 IFT81Q8WYA0 676 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 PEX13Q92968 403 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 WDR92Q96MX6 357 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 GAREM1Q9H706 876 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 TRIM39Q9HCM9 518 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 PHPT1Q9NRX4 125 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-212ENST00000480461 TM7SF3Q9NS93 570 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 RAXQ9Y2V3 346 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 PRKAB1Q9Y478 270 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 FAM169AQ9Y6X4 670 aa12.1□□□□□ -0.47
TRA2B-212ENST00000480461 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 IGLV3-16A0A075B6K0 115 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 A0A1B0GTQ1 180 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CACNB4O00305 520 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 KALRNO60229 2985 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CELA2BP08218 269 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 GIMD1P0DJR0 217 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 ZNF8P17098 575 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 IL9RQ01113 521 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CAV1Q03135 178 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 TMEM115Q12893 351 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 PTK2BQ14289 1009 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 NAA30Q147X3 362 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 DBN1Q16643 649 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 DNAJC21Q5F1R6 531 aaKnown RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 ZRANB3Q5FWF4 1079 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 TEX35Q5T0J7 233 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 ARMC3Q5W041 872 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 TRMT10BQ6PF06 316 aaKnown RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 DOK6Q6PKX4 331 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 UNC5AQ6ZN44 842 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 MARK2Q7KZI7 788 aaKnown RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SNX20Q7Z614 316 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SERPINA9Q86WD7 417 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 ZNF547Q8IVP9 402 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 DDHD1Q8NEL9 900 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 OR4L1Q8NH43 312 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CCL4L1Q8NHW4 92 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 ZNF669Q96BR6 464 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 PDXPQ96GD0 296 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CAMK1GQ96NX5 476 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 ELF4Q99607 663 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-212ENST00000480461 BOCQ9BWV1 1114 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CLPBQ9H078 707 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 OR2AG1Q9H205 316 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 FAM114A2Q9NRY5 505 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SMOXQ9NWM0 555 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 DNAJC28Q9NX36 388 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SLC23A2Q9UGH3 650 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SUFUQ9UMX1 484 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 SLC30A1Q9Y6M5 507 aa12.09□□□□□ -0.47
TRA2B-212ENST00000480461 PRSS38A1L453 326 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CHUKO15111 745 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CD3EAPO15446 510 aaKnown RBP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 OR1I1O60431 355 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 MAGEC1O60732 1142 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SDC3O75056 442 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 USP1O94782 785 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 PYGLP06737 847 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SYPP08247 313 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 FAM153BP0C7A2 387 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 FTH1P19P0C7X4 201 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 MYBL2P10244 700 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 NME1P15531 152 aaKnown RBP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 JUNDP17535 347 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 PGAM1P18669 254 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 HK3P52790 923 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CTSCP53634 463 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 GPX6P59796 221 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CACNG1Q06432 222 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 C1orf61Q13536 156 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 ITGA9Q13797 1035 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CRYMQ14894 314 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 TCEA2Q15560 299 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 PYCR3Q53H96 274 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF789Q5FWF6 425 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 STEAP4Q687X5 459 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 KIAA0930Q6ICG6 404 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 XKR5Q6UX68 686 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 DBX2Q6ZNG2 339 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 TAS2R42Q7RTR8 314 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 C11orf96Q7Z7L8 435 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms