RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 DNMT3LQ9UJW3 386 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MRTO4Q9UKD2 239 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 XYLBO75191 536 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 AGR2O95994 175 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CLK2P49760 499 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 IDH3AP50213 366 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CRYBB1P53674 252 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 AQP4P55087 323 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 HSPA14Q0VDF9 509 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SCRN3Q0VDG4 424 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SUZ12Q15022 739 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ZSWIM7Q19AV6 140 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF423Q2M1K9 1284 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MEDAGQ5VYS4 303 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ADNP2Q6IQ32 1131 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CES3Q6UWW8 571 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 C3orf67Q6ZVT6 689 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 KCTD8Q6ZWB6 473 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TRMT11Q7Z4G4 463 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TMEM192Q8IY95 271 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 C7orf57Q8NEG2 295 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CGREF1Q99674 301 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 GPR22Q99680 433 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TMEM138Q9NPI0 162 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MAN1C1Q9NR34 630 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 RAB23Q9ULC3 237 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 DOLKQ9UPQ8 538 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 A0A0G2JPF8 293 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 HNRNPCL3B7ZW38 293 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PDCD5O14737 125 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 UGT2B17O75795 530 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CCNDBP1O95273 360 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 HNRNPCL4P0DMR1 293 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ACADLP28330 430 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ARHGDIBP52566 201 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 RPS14P62263 151 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF33BQ06732 778 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 RBBP4Q09028 425 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MAB21L1Q13394 359 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SIM2Q14190 667 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 HEPACAMQ14CZ8 416 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ATP13A5Q4VNC0 1218 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 FAM46CQ5VWP2 391 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CHPFQ8IZ52 775 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TTC29Q8NA56 475 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CCDC107Q8WV48 283 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TMEM209Q96SK2 561 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SLC7A5P2Q9GIP4 190 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MRPS7Q9Y2R9 242 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 DIP2AQ14689 1571 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CNTRLQ7Z7A1 2325 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 POLR1AO95602 1720 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 A0A0U1RQJ8 604 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SMIM35A0A1B0GVV1 85 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TYROBPO43914 113 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TMEM63AO94886 807 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TRBC1P01850 177 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 C8GP07360 202 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PPM1AP35813 382 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CACNG1Q06432 222 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PUDPQ08623 228 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 IKBKEQ14164 716 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CPSF6Q16630 551 aaKnown RBP eCLIP6.1□□□□□ -1.433e-6■■■■□ 22.6
PRPF4B-205ENST00000480058 DCST1Q5T197 706 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ATXN7L2Q5T6C5 722 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 C17orf64Q86WR6 236 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 RASAL3Q86YV0 1011 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SERAC1Q96JX3 654 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 AIF1LQ9BQI0 150 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CCDC3Q9BQI4 270 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 COQ10BQ9H8M1 238 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 POFUT2Q9Y2G5 429 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 BTN3A3O00478 584 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 LAMP2P13473 410 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CFL1P23528 166 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 DNAJA1P31689 397 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ARL2P36404 184 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CD86P42081 329 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 OMPP47874 163 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 FCGRTP55899 365 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CTBP1Q13363 440 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MOGSQ13724 837 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 IQCCQ4KMZ1 466 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 GCNT6Q5T4J0 391 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PIK3R6Q5UE93 754 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 EEF1DP3Q658K8 133 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 RHBDF2Q6PJF5 856 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 POMGNT2Q8NAT1 580 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PPM1MQ96MI6 270 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 NFKBIZQ9BYH8 718 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ADAMTS10Q9H324 1103 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 NECTIN3Q9NQS3 549 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PDP1Q9P0J1 537 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PCDHB7Q9Y5E2 793 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PTPRJQ12913 1337 aa6.09□□□□□ -1.43
PRPF4B-205ENST00000480058 IGLV3-22A0A075B6J6 115 aa6.09□□□□□ -1.43
PRPF4B-205ENST00000480058 A6NHS1 94 aa6.09□□□□□ -1.43
PRPF4B-205ENST00000480058 HIST1H2ABP04908 130 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms