RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ERP44Q9BS26 406 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 DPEP2Q9H4A9 486 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ZDHHC3Q9NYG2 299 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 SLC2A6Q9UGQ3 507 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 APOBEC2Q9Y235 224 aaKnown RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 PCDHGA1Q9Y5H4 931 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 PCYT1BQ9Y5K3 369 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 DNMT3AQ9Y6K1 912 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF106Q9H2Y7 1883 aaKnown RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 MYLKQ15746 1914 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 CEP295Q9C0D2 2601 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 IGLV3-16A0A075B6K0 115 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 FAM237BA0A1B0GVD1 139 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 SPAARA0A1B0GVQ0 90 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 KCNJ13O60928 360 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 GOT2P00505 430 aaKnown RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 FTH1P19P0C7X4 201 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 CDK4P11802 303 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ACP5P13686 325 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 VCLP18206 1134 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 PAMP19021 973 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 KCNA4P22459 653 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ACP1P24666 158 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 AK4P27144 223 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 NMBRP28336 390 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 FOXN2P32314 431 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 PPARGP37231 505 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 CDKN1CP49918 316 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ITGA8P53708 1063 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 DNAJC3Q13217 504 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ILKQ13418 452 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ITIH4Q14624 930 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 NR0B2Q15466 257 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 INSCQ1MX18 579 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 FASTKD1Q53R41 847 aaKnown RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 DNAJC21Q5F1R6 531 aaKnown RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 AARS2Q5JTZ9 985 aaKnown RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 LYPLAL1Q5VWZ2 237 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 SLC30A9Q6PML9 568 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 TMEM220Q6QAJ8 160 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 CERS6Q6ZMG9 384 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 TMEM135Q86UB9 458 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 TRAPPC5Q8IUR0 188 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF547Q8IVP9 402 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 PIANPQ8IYJ0 282 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 PDIK1LQ8N165 341 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 RASGEF1AQ8N9B8 481 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 OR6C4Q8NGE1 309 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 MFSD3Q96ES6 412 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 SIGLEC10Q96LC7 697 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 TIMM29Q9BSF4 260 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 TRIM31Q9BZY9 425 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 RAB17Q9H0T7 212 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 FAM96AQ9H5X1 160 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 KLC4Q9NSK0 619 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 SPATS2LQ9NUQ6 558 aaKnown RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 TAAR2Q9P1P5 351 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ANAPC5Q9UJX4 755 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 SNX24Q9Y343 169 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 UTP11Q9Y3A2 253 aaKnown RBP10.68□□□□□ -0.7
ATG4B-219ENST00000479941 PRKAB1Q9Y478 270 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 PLEKHM1Q9Y4G2 1056 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 ST14Q9Y5Y6 855 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 NCOR2Q9Y618 2525 aa10.68□□□□□ -0.7
ATG4B-219ENST00000479941 LY6G6EA0A0G2JKS1 128 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CTAGE15A4D2H0 777 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 EME2A4GXA9 379 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-219ENST00000479941 KLHL33A6NCF5 533 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 OR51F1A6NGY5 319 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 OR2AG2A6NM03 316 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 QSOX1O00391 747 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 USP1O94782 785 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 DKK1O94907 266 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 TRIM16O95361 564 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 GP1BAP07359 652 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CTAGE8P0CG41 777 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 PRSS56P0CW18 603 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 ATP1B2P14415 290 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF7P17097 686 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-219ENST00000479941 NSG1P42857 185 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 ACADVLP49748 655 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CTSCP53634 463 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 B4GALNT1Q00973 533 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CALCOCO2Q13137 446 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 DBN1Q16643 649 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 BCL7AQ4VC05 210 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 DUPD1Q68J44 220 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 KIAA0930Q6ICG6 404 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-219ENST00000479941 C8orf74Q6P047 294 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CRTC3Q6UUV7 619 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 ERMP1Q7Z2K6 904 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 C11orf96Q7Z7L8 435 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CTAGE6Q86UF2 777 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 AMZ2Q86W34 360 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CCNJLQ8IV13 435 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CTAGE4Q8IX94 777 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 SLC35F3Q8IY50 421 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 MPP5Q8N3R9 675 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 GPR156Q8NFN8 814 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 ZDHHC1Q8WTX9 485 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms