RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
PDZRN3-208ENST00000479530 TDRD1Q9BXT4 1180 aaKnown RBP13.21□□□□□ -0.29
PDZRN3-208ENST00000479530 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
PDZRN3-208ENST00000479530 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF639Q9UID6 485 aa13.21□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF236Q9UL36 1845 aa13.21□□□□□ -0.3
PDZRN3-208ENST00000479530 UPK1AO00322 258 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PSMD3O43242 534 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PRSS56P0CW18 603 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GJA8P48165 433 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 CLCN5P51795 746 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 CAP1Q01518 475 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 IFITM3Q01628 133 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 RALGPS2Q86X27 583 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PGBD5Q8N414 524 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TRIB2Q92519 343 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 IGSF8Q969P0 613 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ING2Q9H160 280 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PALMDQ9NP74 551 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PCDH12Q9NPG4 1184 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 Q9Y3F1 56 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 CPQQ9Y646 472 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 FCGR1AP12314 374 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 MTHFD2P13995 350 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PRDX3P30048 256 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TMED10P49755 219 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 UFM1P61960 85 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TUSC3Q13454 348 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 DSC3Q14574 896 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 DPY19L1Q2PZI1 675 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 RTN4RL1Q86UN2 441 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 MIB1Q86YT6 1006 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TBC1D21Q8IYX1 336 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 HS3ST5Q8IZT8 346 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 SPARTQ8N0X7 666 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 SFRP1Q8N474 314 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ARL10Q8N8L6 244 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ATAD1Q8NBU5 361 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 C17orf50Q8WW18 174 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ALPK1Q96QP1 1244 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 FUNDC2Q9BWH2 189 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ENTPD7Q9NQZ7 604 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 DAPK2Q9UIK4 370 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 NOD1Q9Y239 953 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GPR45Q9Y5Y3 372 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 MAN1A2O60476 641 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 S1PR4O95977 384 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 C1RP00736 705 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ASGR1P07306 291 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GSTT2BP0CG30 244 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 LBPP18428 481 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 JAK1P23458 1154 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 CRHBPP24387 322 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 ARSFP54793 590 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TIAL1Q01085 375 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 OXA1LQ15070 435 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 TIGD2Q4W5G0 525 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 BRMS1LQ5PSV4 323 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 BROXQ5VW32 411 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 KANK2Q63ZY3 851 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 SLC16A12Q6ZSM3 486 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 KIAA0408Q6ZU52 694 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PTRH1Q86Y79 214 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GOLM1Q8NBJ4 401 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PDZD8Q8NEN9 1154 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 RAB2BQ8WUD1 216 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 SH3YL1Q96HL8 342 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 CNDP2Q96KP4 475 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 SMIM14Q96QK8 99 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GPN2Q9H9Y4 310 aaPredicted RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 GMIPQ9P107 970 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 FAM32AQ9Y421 112 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 PCDHGA8Q9Y5G5 932 aa13.2□□□□□ -0.3
PDZRN3-208ENST00000479530 A0A1W2PP18 115 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF623O75123 536 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 CAPN15O75808 1086 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 MATN4O95460 622 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 ESRRBO95718 433 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 CD1DP15813 335 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 JUNBP17275 347 aaPredicted RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 HTR1BP28222 390 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 RAD23AP54725 363 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 TSPY1Q01534 308 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 YWHAHQ04917 246 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms