RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 XKR6Q5GH73 641 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 SIRPB2Q5JXA9 342 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 MBLAC2Q68D91 279 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 SERPINA13PQ6UXR4 307 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 ARHGAP36Q6ZRI8 547 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 UTS2BQ765I0 119 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 CDH24Q86UP0 819 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 NAT16Q8N8M0 369 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 PPP1R16AQ96I34 528 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 SMAD5Q99717 465 aaKnown RBP14.22□□□□□ -0.13
COL20A1-206ENST00000479501 MOCS1Q9NZB8 636 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 KCNE2Q9Y6J6 123 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 MEIS3P2A8K0S8 358 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 GRM6O15303 877 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 GPR1P46091 355 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 GPR17Q13304 367 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 PCLAFQ15004 111 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 SPESP1Q6UW49 350 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 RASAL3Q86YV0 1011 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 TSGA13Q96PP4 275 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 CHID1Q9BWS9 393 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 BRD9Q9H8M2 597 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 NMUR1Q9HB89 426 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
COL20A1-206ENST00000479501 PIP5K1BO14986 540 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 HSPA7P48741 367 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 GPRIN1Q7Z2K8 1008 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 ERLEC1Q96DZ1 483 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 RNFT2Q96EX2 444 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 HBEGFQ99075 208 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 PAAF1Q9BRP4 392 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 MIOSQ9NXC5 875 aa14.22□□□□□ -0.13
COL20A1-206ENST00000479501 RBM47A0AV96 593 aaKnown RBP14.21□□□□□ -0.13
COL20A1-206ENST00000479501 ZBTB42B2RXF5 422 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 CNTN5O94779 1100 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 ALDOAP04075 364 aaKnown RBP14.21□□□□□ -0.13
COL20A1-206ENST00000479501 UROSP10746 265 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 COL6A1P12109 1028 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 POLR2JP52435 117 aaKnown RBP14.21□□□□□ -0.13
COL20A1-206ENST00000479501 MS4A13Q5J8X5 152 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 ARMC3Q5W041 872 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 RAET1GQ6H3X3 334 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 ARMC6Q6NXE6 501 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 PAOXQ6QHF9 649 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 PAQR3Q6TCH7 311 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 SERPINA9Q86WD7 417 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 OOSP2Q86WS3 158 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 FAM156AQ8NDB6 213 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 TMEM209Q96SK2 561 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 OSBPL6Q9BZF3 934 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 TRIM39Q9HCM9 518 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 TUBA8Q9NY65 449 aaPredicted RBP14.21□□□□□ -0.13
COL20A1-206ENST00000479501 NUDT4Q9NZJ9 180 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 C3orf18Q9UK00 162 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 IL1BP01584 269 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 IMPDH1P20839 514 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 PPP2R1BP30154 601 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 GJA5P36382 358 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 RBM20Q5T481 1227 aaKnown RBP14.21□□□□□ -0.13
COL20A1-206ENST00000479501 ATXN7L2Q5T6C5 722 aaPredicted RBP14.21□□□□□ -0.13
COL20A1-206ENST00000479501 CYP4Z1Q86W10 505 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 ASZ1Q8WWH4 475 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 TSSK3Q96PN8 268 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 CIB1Q99828 191 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 REEP1Q9H902 201 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 MAPRE3Q9UPY8 281 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 DOCK2Q92608 1830 aa14.21□□□□□ -0.13
COL20A1-206ENST00000479501 MBLAC1A4D2B0 266 aaPredicted RBP14.21□□□□□ -0.14
COL20A1-206ENST00000479501 A8MT66 165 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 SLC22A2O15244 555 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 OR4F21O95013 312 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 AOC1P19801 751 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 MTX3Q5HYI7 312 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 DGKKQ5KSL6 1271 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 IL23RQ5VWK5 629 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 REP15Q6BDI9 236 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 CYS1Q717R9 158 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 C14orf80Q86SX3 495 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 ZNF280BQ86YH2 543 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 ZBTB2Q8N680 514 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 OR2T34Q8NGX1 318 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 OR2T3Q8NH03 318 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 EBF2Q9HAK2 575 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 GABRQQ9UN88 632 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 STRCQ7RTU9 1775 aa14.21□□□□□ -0.14
COL20A1-206ENST00000479501 DDX60LQ5H9U9 1706 aaKnown RBP14.21□□□□□ -0.14
COL20A1-206ENST00000479501 ILVBLA1L0T0 632 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 GSTM1P09488 218 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 PEX2P28328 305 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 TOP3AQ13472 1001 aaPredicted RBP14.2□□□□□ -0.14
COL20A1-206ENST00000479501 TIMM50Q3ZCQ8 353 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 ATG14Q6ZNE5 492 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 SPPL2CQ8IUH8 684 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 PLD6Q8N2A8 252 aaKnown RBP14.2□□□□□ -0.14
COL20A1-206ENST00000479501 OR2T12Q8NG77 320 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 RTP4Q96DX8 246 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 PANX1Q96RD7 426 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 TFB2MQ9H5Q4 396 aaKnown RBP14.2□□□□□ -0.14
COL20A1-206ENST00000479501 PCDH12Q9NPG4 1184 aa14.2□□□□□ -0.14
COL20A1-206ENST00000479501 EIF2B4Q9UI10 523 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms