RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RASGEF1AQ8N9B8 481 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 NAT8LQ8N9F0 302 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 FAM181AQ8N9Y4 354 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 SPATA4Q8NEY3 305 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 DTX3LQ8TDB6 740 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 PATE1Q8WXA2 126 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 SLCO2A1Q92959 643 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 HDAC10Q969S8 669 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 CDKN2AIPNLQ96HQ2 116 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 TTC25Q96NG3 672 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 RANBP9Q96S59 729 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 TRIM56Q9BRZ2 755 aaKnown RBP10.14□□□□□ -0.79
HDAC6-222ENST00000478095 BOCQ9BWV1 1114 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 TRIM31Q9BZY9 425 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 IL22Q9GZX6 179 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 RMI1Q9H9A7 625 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 SPATS2LQ9NUQ6 558 aaKnown RBP10.14□□□□□ -0.79
HDAC6-222ENST00000478095 BFARQ9NZS9 450 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 TAAR2Q9P1P5 351 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 APOBEC2Q9Y235 224 aaKnown RBP10.14□□□□□ -0.79
HDAC6-222ENST00000478095 DNAJC16Q9Y2G8 782 aa10.14□□□□□ -0.79
HDAC6-222ENST00000478095 TRBV23OR9-2A0A075B6M9 112 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CCDC162PA2VCL2 907 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 H7C0S8 307 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 DNALI1O14645 258 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CHUKO15111 745 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CASC3O15234 703 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 HYAL3O43820 417 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 SNX2O60749 519 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 EML2O95834 649 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 GOT2P00505 430 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 ADRB1P08588 477 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CKMT1AP12532 417 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 ACP1P24666 158 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 NMBRP28336 390 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 PBLDP30039 288 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 NPY2RP49146 381 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 MAZP56270 477 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 B4GALNT1Q00973 533 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 LAMB3Q13751 1172 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 LRP8Q14114 963 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 INSCQ1MX18 579 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 FNBP1LQ5T0N5 605 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CASC4Q6P4E1 433 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 LVRNQ6Q4G3 990 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 AFTPHQ6ULP2 937 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 ERMP1Q7Z2K6 904 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 EFL1Q7Z2Z2 1120 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 LRRTM4Q86VH4 590 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CAND1Q86VP6 1230 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 PPIL6Q8IXY8 311 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 PIANPQ8IYJ0 282 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 NXPE1Q8N323 547 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 CHCHD4Q8N4Q1 142 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 BEND7Q8N7W2 519 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 OR6P1Q8NGX9 317 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 IFI44Q8TCB0 444 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 ZDHHC1Q8WTX9 485 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 GLMNQ92990 594 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 ULK4Q96C45 1275 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 RUNDC3BQ96NL0 473 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 COPS8Q99627 209 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 ZCCHC2Q9C0B9 1178 aaKnown RBP10.13□□□□□ -0.79
HDAC6-222ENST00000478095 OSGEPL1Q9H4B0 414 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 KLC4Q9NSK0 619 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 FAM8A1Q9UBU6 413 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 SLC23A2Q9UGH3 650 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 PADI4Q9UM07 663 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 SPTBN4Q9H254 2564 aa10.13□□□□□ -0.79
HDAC6-222ENST00000478095 EME2A4GXA9 379 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 AGAP14A8MT82 685 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 GPR89AB7ZAQ6 455 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 AP3B1O00203 1094 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 KMOO15229 486 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 RAD51CO43502 376 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 NOBOXO60393 691 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 BANF1O75531 89 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 GPR89BP0CG08 455 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 ZNF7P17097 686 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 PSMA3P25788 255 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 ACRV1P26436 265 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 FOXN2P32314 431 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 RPIAP49247 311 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 DUSP3P51452 185 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 PRAMEP78395 509 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 CACNG1Q06432 222 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 DHX34Q14147 1143 aaKnown RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SEPT7Q16181 437 aaKnown RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 DBN1Q16643 649 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 GPR33Q49SQ1 333 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 C14orf28Q4W4Y0 310 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 PERM1Q5SV97 790 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 TMEM220Q6QAJ8 160 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SYDE1Q6ZW31 735 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-222ENST00000478095 NLRP9Q7RTR0 991 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 SERPINA9Q86WD7 417 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 MARCH9Q86YJ5 346 aa10.12□□□□□ -0.79
HDAC6-222ENST00000478095 NAGSQ8N159 534 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms