RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MSRB2Q9Y3D2 182 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 HS3ST4Q9Y661 456 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CFAP54Q96N23 3096 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 LOC100653049A0A140TA62 436 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 A0A1W2PQH9 124 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CCDC78A2IDD5 438 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SDHDO14521 159 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 AIM2O14862 343 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SEPT4O43236 478 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 MSI1O43347 362 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 AHCYL1O43865 530 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 FLNBO75369 2602 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ZMPSTE24O75844 475 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 KRT34O76011 436 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 RTN3O95197 1032 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 MOCS2O96007 188 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PENKP01210 267 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 LYNP07948 512 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 F7P08709 466 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 LTA4HP09960 611 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PIM1P11309 404 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 IMPDH2P12268 514 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 UQCRBP14927 111 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 RAG1P15918 1043 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ME2P23368 584 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CST5P28325 142 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 EPHA3P29320 983 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SLC26A3P40879 764 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 MAGEA11P43364 429 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 GLRBP48167 497 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 NUDT2P50583 147 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ATP4BP51164 291 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 INHBCP55103 352 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 RPL6Q02878 288 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 IL10RBQ08334 325 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 GALNT1Q10472 559 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 DLG1Q12959 904 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ART3Q13508 389 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ITGA7Q13683 1181 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SQLEQ14534 574 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CNGA3Q16281 694 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PAN2Q504Q3 1202 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PIGGQ5H8A4 983 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 TCHHL1Q5QJ38 904 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PIK3R6Q5UE93 754 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 MARC1Q5VT66 337 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 NXNQ6DKJ4 435 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 OR52E8Q6IFG1 317 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 FAM45BPQ6NSW5 357 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 GLB1LQ6UWU2 654 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ARMCX6Q7L4S7 300 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 C14orf80Q86SX3 495 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 KBTBD6Q86V97 674 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 C12orf40Q86WS4 652 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 HPS6Q86YV9 775 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CEP97Q8IW35 865 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SCN4BQ8IWT1 228 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ZNF683Q8IZ20 524 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ST13P4Q8IZP2 240 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 DSELQ8IZU8 1212 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PQLC1Q8N2U9 271 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 TEX26Q8N6G2 289 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CCNYL1Q8N7R7 359 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 KDM1BQ8NB78 822 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 TXNDC5Q8NBS9 432 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 FAM45AQ8TCE6 357 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 AGR3Q8TD06 166 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 HASPINQ8TF76 798 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 GDPD5Q8WTR4 605 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 HEXDCQ8WVB3 486 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 UCMAQ8WVF2 138 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 HERVK_113Q902F9 699 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PEX13Q92968 403 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 UBE2FQ969M7 185 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CCDC124Q96CT7 223 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CATSPER2Q96P56 530 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 GBP5Q96PP8 586 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 OMDQ99983 421 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 TRMOQ9BU70 441 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 FTHL17Q9BXU8 183 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 NUF2Q9BZD4 464 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SHCBP1LQ9BZQ2 653 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 MFSD1Q9H3U5 465 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 Q9H521 79 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 POMKQ9H5K3 350 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 WDR55Q9H6Y2 383 aaPredicted RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 NMUR1Q9HB89 426 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 ZBTB26Q9HCK0 441 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 NT5MQ9NPB1 228 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 COMMD8Q9NX08 183 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 UTP6Q9NYH9 597 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 GTSE1Q9NYZ3 720 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 IL37Q9NZH6 218 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SLC2A6Q9UGQ3 507 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 SFMBT1Q9UHJ3 866 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 PFDN2Q9UHV9 154 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 RIMKLBQ9ULI2 386 aa4.93□□□□□ -1.62
SF3B6-202ENST00000478050 CNOT6Q9ULM6 557 aaKnown RBP4.93□□□□□ -1.62
SF3B6-202ENST00000478050 POLR3KQ9Y2Y1 108 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms