RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 VPS35Q96QK1 796 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 NAT9Q9BTE0 207 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 FAM129AQ9BZQ8 928 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 FOXP3Q9BZS1 431 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 FGF22Q9HCT0 170 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 PARD6AQ9NPB6 346 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 MTRF1LQ9UGC7 380 aaKnown RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 CRLS1Q9UJA2 301 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 SLC6A14Q9UN76 642 aa11.34□□□□□ -0.59
CBWD3-206ENST00000478048 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
CBWD3-206ENST00000478048 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
CBWD3-206ENST00000478048 ASMTLO95671 621 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 CEACAM5P06731 702 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 PAMP19021 973 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 HTR1BP28222 390 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 SSTR1P30872 391 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 GPX6P59796 221 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 VSNL1P62760 191 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 B4GALNT1Q00973 533 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 DBN1Q16643 649 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 LONRF1Q17RB8 773 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 ALG11Q2TAA5 492 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 SPANXN3Q5MJ09 141 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 STEAP4Q687X5 459 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
CBWD3-206ENST00000478048 RABEPKQ7Z6M1 372 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 ADGRG6Q86SQ4 1221 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 SERPINA9Q86WD7 417 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 PHYKPLQ8IUZ5 450 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 CCNJLQ8IV13 435 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 NXPE1Q8N323 547 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 DDHD1Q8NEL9 900 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 OR56A4Q8NGH8 313 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 OR1E3Q8WZA6 343 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 SGSM3Q96HU1 749 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 WDR92Q96MX6 357 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 BOCQ9BWV1 1114 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 PHACTR1Q9C0D0 580 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 OR2AG1Q9H205 316 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 TCEAL2Q9H3H9 227 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-206ENST00000478048 IL21RQ9HBE5 538 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 CATSPERZQ9NTU4 200 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 C20orf96Q9NUD7 363 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-206ENST00000478048 ATXN10Q9UBB4 475 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 SLC17A4Q9Y2C5 497 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 GVINP1Q7Z2Y8 2422 aa11.33□□□□□ -0.6
CBWD3-206ENST00000478048 LNP1A1A4G5 178 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 MAGEC1O60732 1142 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TTC4O95801 387 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF806P0C7X5 589 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ERVK-10P10266 1014 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF8P17098 575 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TGM1P22735 817 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ACRV1P26436 265 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TUBB4BP68371 445 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 PTK2BQ14289 1009 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 GPR33Q49SQ1 333 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 FASTKD1Q53R41 847 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 HSP90AA5PQ58FG0 334 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CCNI2Q6ZMN8 369 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 RD3Q7Z3Z2 195 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 KCNMB4Q86W47 210 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 DCP2Q8IU60 420 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 PALM2Q8IXS6 379 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 SKA1Q96BD8 255 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 NUSAP1Q9BXS6 441 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 LRRC4CQ9HCJ2 640 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TRIM39Q9HCM9 518 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 RXFP3Q9NSD7 469 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 SEMA4GQ9NTN9 838 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 SLC17A6Q9P2U8 582 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 MOSPD1Q9UJG1 213 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 PRKAB1Q9Y478 270 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 PRSS38A1L453 326 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 OR1I1O60431 355 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 DNAJC6O75061 913 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 PIAS1O75925 651 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ENGP17813 658 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 AKT1P31749 480 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 SRP54P61011 504 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CTBP1Q13363 440 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 TCEA2Q15560 299 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 KYNUQ16719 465 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 HLA-BQ31612 363 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 LDLRAP1Q5SW96 308 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 NEPROQ6NW34 567 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 C3orf62Q6ZUJ4 267 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 DET1Q7L5Y6 550 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 PARGQ86W56 976 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms