RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CBWD5Q5RIA9 395 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ANKRD45Q5TZF3 282 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 SLC24A5Q71RS6 500 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 CEP70Q8NHQ1 597 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 NCSTNQ92542 709 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ZNF558Q96NG5 402 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 API5Q9BZZ5 524 aaKnown RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 CTDSP1Q9GZU7 261 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 HIPK2Q9H2X6 1198 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 KLHL31Q9H511 634 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 WDR6Q9NNW5 1121 aaKnown RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 LTB4R2Q9NPC1 389 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 RASSF1Q9NS23 344 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 PADI3Q9ULW8 664 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 PCDHA7Q9UN72 937 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 DHDHQ9UQ10 334 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 PCDHGB3Q9Y5G1 929 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 DOCK7Q96N67 2140 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TARSL2A2RTX5 802 aaKnown RBP4.79□□□□□ -1.64
VPS50-214ENST00000477935 OR6C68A6NDL8 312 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 H0Y626 953 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 I6L893 689 aaPredicted RBP4.79□□□□□ -1.64
VPS50-214ENST00000477935 M0QZ92 97 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 IKBKBO14920 756 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 RGS14O43566 566 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 MBD4O95243 580 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TRIM16O95361 564 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CBX6O95503 412 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 GGPS1O95749 300 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 LGALS2P05162 132 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 MYZAPP0CAP1 466 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TSPY3P0CV98 308 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TSPY8P0CW00 308 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TDGF1P13385 188 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TNNT1P13805 278 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CSRP1P21291 193 aaKnown RBP4.79□□□□□ -1.64
VPS50-214ENST00000477935 AVPR1AP37288 418 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 SKIV2L2P42285 1042 aaKnown RBP4.79□□□□□ -1.64
VPS50-214ENST00000477935 HALP42357 657 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CCR3P51677 355 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 SNAP25P60880 206 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 ERV3-1Q14264 604 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 ARHGEF16Q5VV41 709 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TSSK4Q6SA08 328 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 ZNF852Q6ZMS4 543 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 SERPINA11Q86U17 422 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TRIM74Q86UV6 250 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TRIM73Q86UV7 250 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 ZDHHC23Q8IYP9 409 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CADM3Q8N126 398 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 FBXL14Q8N1E6 418 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 NME8Q8N427 588 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CEP76Q8TAP6 659 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 RSPH1Q8WYR4 309 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 MIB2Q96AX9 1013 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 ZNF479Q96JC4 524 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 MEIS3Q99687 375 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TMEM117Q9H0C3 514 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CWH43Q9H720 699 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 CATSPERBQ9H7T0 1116 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 RGS18Q9NS28 235 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 TMEM161AQ9NX61 479 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 PLK2Q9NYY3 685 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 GRHL1Q9NZI5 618 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 PCDHGA5Q9Y5G8 931 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 ATG2AQ2TAZ0 1938 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 PIEZO2Q9H5I5 2752 aa4.79□□□□□ -1.64
VPS50-214ENST00000477935 DENND3A2RUS2 1198 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 INAFM1C9JVW0 142 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 J3QKU1 62 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 HSPB6O14558 160 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 HBP1O60381 514 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 N4BP1O75113 896 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 SURF6O75683 361 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 NGFRP08138 427 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 HSPD1P10809 573 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 PLA2G2AP14555 144 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 EPCAMP16422 314 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 CA8P35219 290 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 DPP6P42658 865 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 PTPN9P43378 593 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 CXCL12P48061 93 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 ZP1P60852 638 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 MRPS6P82932 125 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 TROAPQ12815 778 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 GPS2Q13227 327 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 HTR4Q13639 388 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 EFR3AQ14156 821 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 NEDD9Q14511 834 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 COL28A1Q2UY09 1125 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 SH2D4BQ5SQS7 431 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 OTUD1Q5VV17 481 aaPredicted RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 HEPHL1Q6MZM0 1159 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 ZSCAN25Q6NSZ9 544 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 DENND1BQ6P3S1 775 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms