RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SLC40A1Q9NP59 571 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 FARSAQ9Y285 508 aaKnown RBP19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 CELSR1Q9NYQ6 3014 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 C1orf232A0A0U1RR37 186 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 TMEM191CA6NGB0 347 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 PDZK1P1A8MUH7 402 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 KRT86O43790 486 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 CPNE3O75131 537 aaKnown RBP19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 KRT38O76015 456 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 ATP1A3P13637 1013 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 AMPD1P23109 780 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 RPL26P61254 145 aaKnown RBP19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 PDE1BQ01064 536 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 KCNAB1Q14722 419 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 INSCQ1MX18 579 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 CRTC3Q6UUV7 619 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF517Q6ZMY9 492 aaPredicted RBP19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 TTC13Q8NBP0 860 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 CSPG4P5Q96PW8 444 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 TRIM7Q9C029 511 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 TAS2R14Q9NYV8 317 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 PKD2L2Q9NZM6 624 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 SLC23A2Q9UGH3 650 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 RPL26L1Q9UNX3 145 aaKnown RBP19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 CHKBQ9Y259 395 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 ADGRG4Q8IZF6 3080 aa19.89■□□□□ 0.77
PDLIM1-202ENST00000477757 IGHV5-51A0A0C4DH38 117 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 RGSL1A5PLK6 1076 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 CHUKO15111 745 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 PRLP01236 227 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 BRAFP15056 766 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 SERPINB6P35237 376 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 PPP1CAP62136 330 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 ACY1Q03154 408 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 KRT31Q15323 416 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 SEPT7Q16181 437 aaKnown RBP19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 PLA2G4EQ3MJ16 856 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 TDRD12Q587J7 1177 aaKnown RBP19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF569Q5MCW4 686 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 FKBP15Q5T1M5 1219 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 IZUMO3Q5VZ72 239 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 ABRAXAS1Q6UWZ7 409 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 POLNQ7Z5Q5 900 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 IQCKQ8N0W5 287 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 LPCAT1Q8NF37 534 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 SNRNP40Q96DI7 357 aaKnown RBP19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF514Q96K75 400 aaPredicted RBP19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 TIMM29Q9BSF4 260 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 WASH6PQ9NQA3 447 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 FGF21Q9NSA1 209 aa19.88■□□□□ 0.77
PDLIM1-202ENST00000477757 OR52A4PA6NMU1 304 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 TMEM63AO94886 807 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 EBLN1P0CF75 366 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 CA4P22748 312 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 DSC2Q02487 901 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 ITKQ08881 620 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF648Q5T619 568 aaPredicted RBP19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 AGAP9Q5VTM2 703 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 PPP1R2P3Q6NXS1 205 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 GLIS1Q8NBF1 620 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 SMAD5Q99717 465 aaKnown RBP19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 TRIM39Q9HCM9 518 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 ARFGAP3Q9NP61 516 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 ASF1BQ9NVP2 202 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 GPR83Q9NYM4 423 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 DNAJC16Q9Y2G8 782 aa19.87■□□□□ 0.77
PDLIM1-202ENST00000477757 JCHAINP01591 159 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 ZNF7P17097 686 aaPredicted RBP19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 CES1P23141 567 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 IL1R2P27930 398 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 GPS2Q13227 327 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 SMTNL2Q2TAL5 461 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 ANKRD20A8PQ5CZ79 823 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 CDKAL1Q5VV42 579 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 WASH2PQ6VEQ5 465 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 ADGRG6Q86SQ4 1221 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 KMT5CQ86Y97 462 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 LRRC49Q8IUZ0 686 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 NEK11Q8NG66 645 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 MR1Q95460 341 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 CXorf40BQ96DE9 158 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 MOCOSQ96EN8 888 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 SYT11Q9BT88 431 aa19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDLIM1-202ENST00000477757 F8P00451 2351 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 ANKUB1A6NFN9 424 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 KMOO15229 486 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 SCRG1O75711 98 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 SLC25A14O95258 325 aaPredicted RBP19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 TPM2P07951 284 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 RPL10P27635 214 aaKnown RBP19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 PCK1P35558 622 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 ITGA1P56199 1179 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 UBE2HP62256 183 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 LRRTM4Q86VH4 590 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 TMEM102Q8N9M5 508 aaPredicted RBP19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 CCHCR1Q8TD31 782 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 MAML1Q92585 1016 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 CHST8Q9H2A9 424 aa19.85■□□□□ 0.77
PDLIM1-202ENST00000477757 PCDH9Q9HC56 1237 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms