RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CHRNGP07510 517 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 RPS17P08708 135 aaKnown RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 F7P08709 466 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 KRT16P08779 473 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 MTHFD2P13995 350 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 MYOGP15173 224 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 NCF2P19878 526 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 CCND1P24385 295 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 MAGEA10P43363 369 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 STK19P49842 368 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 RAP1GDS1P52306 607 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 KCNJ2P63252 427 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ARHGAP8P85298 464 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 CDKL1Q00532 357 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 PTSQ03393 145 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FCHO2Q0JRZ9 810 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 GRIK2Q13002 908 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SP140Q13342 867 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ELAVL3Q14576 367 aaKnown RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 PCBP2Q15366 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
VMA21-203ENST00000477649 OR4D1Q15615 310 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 CHRNA6Q15825 494 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 GEN1Q17RS7 908 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ZNF284Q2VY69 593 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SETMARQ53H47 684 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 UNC50Q53HI1 259 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FAM78AQ5JUQ0 283 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ATAT1Q5SQI0 421 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 LDLRAP1Q5SW96 308 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 C9orf50Q5SZB4 431 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 GPRC6AQ5T6X5 926 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ZNF697Q5TEC3 545 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 PPP2R2DQ66LE6 453 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 LRRC66Q68CR7 880 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FAM151BQ6UXP7 276 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 TMC5Q6UXY8 1006 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 RNF165Q6ZSG1 346 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 Q6ZVU0 165 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 NEK10Q6ZWH5 1172 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FRA10AC1Q70Z53 315 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 DPPA4Q7L190 304 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ZNF765Q7L2R6 523 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 CYP2U1Q7Z449 544 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ADGRD2Q7Z7M1 963 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 RBM23Q86U06 439 aaKnown RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 LONP2Q86WA8 852 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 TCAIMQ8N3R3 496 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SPATA6LQ8N4H0 392 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 TRAM1L1Q8N609 369 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ZBTB2Q8N680 514 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 OR56A4Q8NGH8 313 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 OR6K2Q8NGY2 324 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FGF13Q92913 245 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 RAB7BQ96AH8 199 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 PHF21BQ96EK2 531 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SGF29Q96ES7 293 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 LINGO1Q96FE5 620 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 DCUN1D1Q96GG9 259 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 KLHL32Q96NJ5 620 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 VPS35Q96QK1 796 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FAM83CQ9BQN1 747 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 RTKNQ9BST9 563 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ZSCAN5AQ9BUG6 496 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FAM126AQ9BYI3 521 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 TRIM54Q9BYV2 358 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 CIPCQ9C0C6 399 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 FAM83DQ9H4H8 585 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 MRPL40Q9NQ50 206 aaKnown RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 TAS2R1Q9NYW7 299 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 LMCD1Q9NZU5 365 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 B4GALT6Q9UBX8 382 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SUN2Q9UH99 717 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 BCAP29Q9UHQ4 241 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 WASF2Q9Y6W5 498 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ALPK3Q96L96 1907 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 RANBP2P49792 3224 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 MYLKQ15746 1914 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 PABPN1LA6NDY0 278 aaKnown RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 HEPACAM2A8MVW5 462 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 C1QTNF3-AMACRE9PGA6 284 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 AZIN1O14977 448 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CHUKO15111 745 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 OR1I1O60431 355 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 NIPSNAP2O75323 286 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 GPC4O75487 556 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ECI2O75521 394 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 LEFTY1O75610 366 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 CIB2O75838 187 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 TM7SF2O76062 418 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 SLC25A14O95258 325 aaPredicted RBP7.84□□□□□ -1.15
VMA21-203ENST00000477649 ATP6V1G2O95670 118 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ESRRBO95718 433 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 FTH1P02794 183 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 C8GP07360 202 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 MPC1LP0DKB6 136 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 VCLP18206 1134 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 KCNA5P22460 613 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 ITGB7P26010 798 aa7.84□□□□□ -1.15
VMA21-203ENST00000477649 HNRNPH1P31943 449 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms