RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 ZNF140P52738 457 aaPredicted RBP15.33■□□□□ 0.04
COMMD6-209ENST00000477377 PRPSAP1Q14558 356 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 C16orf72Q14CZ0 275 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 CLPPQ16740 277 aaPredicted RBP15.33■□□□□ 0.04
COMMD6-209ENST00000477377 PLA2G4EQ3MJ16 856 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 GPRC6AQ5T6X5 926 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 RAB11FIP2Q7L804 512 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 PRUNE1Q86TP1 453 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 LRRTM4Q86VH4 590 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 SPACA3Q8IXA5 215 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 GLIS1Q8NBF1 620 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 OR13C4Q8NGS5 318 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 ZNF398Q8TD17 642 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 FERMT1Q9BQL6 677 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 TIMM29Q9BSF4 260 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 TLR10Q9BXR5 811 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 EPB41L5Q9HCM4 733 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
COMMD6-209ENST00000477377 PDP2Q9P2J9 529 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 FKBPLQ9UIM3 349 aa15.33■□□□□ 0.04
COMMD6-209ENST00000477377 PRAMEF33A0A0G2JMD5 474 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 TMX2-CTNND1H3BSU7 103 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 PLD2O14939 933 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 STX7O15400 261 aaKnown RBP15.32■□□□□ 0.04
COMMD6-209ENST00000477377 SNX2O60749 519 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 STK10O94804 968 aaKnown RBP15.32■□□□□ 0.04
COMMD6-209ENST00000477377 ITGA2BP08514 1039 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 CCDC175P0C221 793 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 ETS1P14921 441 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 ITIH1P19827 911 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 PSMA3P25788 255 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 SLC19A1P41440 591 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 LIMK2P53671 638 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 HHEXQ03014 270 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 TLE3Q04726 772 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 EIF3IQ13347 325 aaKnown RBP15.32■□□□□ 0.04
COMMD6-209ENST00000477377 RPS6KA1Q15418 735 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 ABRAXAS1Q6UWZ7 409 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 PIM3Q86V86 326 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 FBXO39Q8N4B4 442 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 NAT14Q8WUY8 206 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 C1orf54Q8WWF1 131 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 C19orf43Q9BQ61 176 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 PRORYQ9H606 182 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 WDR37Q9Y2I8 494 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 PKP3Q9Y446 797 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 LOXL2Q9Y4K0 774 aa15.32■□□□□ 0.04
COMMD6-209ENST00000477377 CCL22O00626 93 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 ZNF189O75820 626 aaPredicted RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 SRP72O76094 671 aaKnown RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 PRAMEF1O95521 474 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 AP2A1O95782 977 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 THRAP10827 490 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 TPH1P17752 444 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 XRCC1P18887 633 aaPredicted RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 RBMS1P29558 406 aaKnown RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 STIP1P31948 543 aaKnown RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 MLLT3P42568 568 aaPredicted RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 ARSDP51689 593 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 PCBP4P57723 403 aaKnown RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 CCDC173Q0VFZ6 552 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 CLCA4Q14CN2 919 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 P3H1Q32P28 736 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 FOXR1Q6PIV2 292 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 WASH2PQ6VEQ5 465 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 FAM83HQ6ZRV2 1179 aaPredicted RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 ARHGEF18Q6ZSZ5 1173 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 PDZD3Q86UT5 571 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 RCBTB1Q8NDN9 531 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 ZNF248Q8NDW4 579 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 OR4D9Q8NGE8 314 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 WASH6PQ9NQA3 447 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 THSD1Q9NS62 852 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 PIH1D1Q9NWS0 290 aaKnown RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 KCNK4Q9NYG8 393 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 OGFRQ9NZT2 677 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 CPNE7Q9UBL6 633 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 DNAJC16Q9Y2G8 782 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 PCDHGA7Q9Y5G6 932 aa15.31■□□□□ 0.04
COMMD6-209ENST00000477377 SMG1Q96Q15 3661 aaKnown RBP15.31■□□□□ 0.04
COMMD6-209ENST00000477377 KIR2DS5A0A0G2JLQ3 304 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 A0A0G2JNG1 304 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 C2orf81A6NN90 581 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 KIR2DS3K7RE56 304 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 AGRPO00253 132 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 CCL4P13236 92 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 MPSTP25325 297 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 RPL10P27635 214 aaKnown RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 GRIA1P42261 906 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 ABCG1P45844 678 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 CDKN1CP49918 316 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 GPLD1P80108 840 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 DMPKQ09013 629 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 NFATC2Q13469 925 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 ITGA9Q13797 1035 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 KIR2DS5Q14953 304 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 MAP9Q49MG5 647 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 LDLRAP1Q5SW96 308 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms