RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RAD18Q9NS91 495 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 KLC4Q9NSK0 619 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 SYBUQ9NX95 663 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 PCDHGA1Q9Y5H4 931 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 PRSS21Q9Y6M0 314 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CHD8Q9HCK8 2581 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 ARHGEF17Q96PE2 2063 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 RP1P56715 2156 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 AGAP14A8MT82 685 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 CES2O00748 559 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 PSMD3O43242 534 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 B4GAT1O43505 415 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 BANF1O75531 89 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 CDK14O94921 469 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 CRTAMO95727 393 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 BRAFP15056 766 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 ZNF7P17097 686 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 TCP1P17987 556 aaKnown RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 PSMA3P25788 255 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 NMBRP28336 390 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 PBLDP30039 288 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 FOXN2P32314 431 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 DRG2P55039 364 aaKnown RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 TARDBPQ13148 414 aaKnown RBP eCLIP12.26□□□□□ -0.45
APTX-220ENST00000476858 SEPT7Q16181 437 aaKnown RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 DBN1Q16643 649 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 C14orf28Q4W4Y0 310 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 ZRANB3Q5FWF4 1079 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 TSTD2Q5T7W7 516 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 CDCP2Q5VXM1 449 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 PDPK2PQ6A1A2 396 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 TMEM220Q6QAJ8 160 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 CCNI2Q6ZMN8 369 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 B3GNT8Q7Z7M8 397 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 LDB1Q86U70 411 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 HDAC10Q969S8 669 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 PWWP2AQ96N64 755 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 PPP1R2P1Q96PQ5 205 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 NRTNQ99748 197 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 TRIM51Q9BSJ1 452 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 CDH19Q9H159 772 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 SMOXQ9NWM0 555 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 MARCH4Q9P2E8 410 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 FAM8A1Q9UBU6 413 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 ATXN7L1Q9ULK2 861 aaPredicted RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 WDR37Q9Y2I8 494 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 TCAF1Q9Y4C2 921 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 GOLGA4Q13439 2230 aaKnown RBP12.26□□□□□ -0.45
APTX-220ENST00000476858 FREM2Q5SZK8 3169 aa12.26□□□□□ -0.45
APTX-220ENST00000476858 ZFC3H1O60293 1989 aaKnown RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 TRBV5-4A0A0C4DH59 114 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 CTAGE9A4FU28 777 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 FAM221BA6H8Z2 402 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 ERI2A8K979 691 aaKnown RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 ZNF189O75820 626 aaPredicted RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 CAPNS1P04632 268 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 IVDP26440 423 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 ARNTP27540 789 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 RPL10P27635 214 aaKnown RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 MAGEA6P43360 314 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 OR1D5P58170 312 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 CFHR1Q03591 330 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 FNBP1LQ5T0N5 605 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 NKAIN2Q5VXU1 208 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 NAPRTQ6XQN6 538 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 LINC00523Q86TU6 105 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 LRRTM4Q86VH4 590 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 SERPINA9Q86WD7 417 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 TRAPPC5Q8IUR0 188 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 NXPE1Q8N323 547 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 CLDN19Q8N6F1 224 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 MAPK15Q8TD08 544 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 DTX3LQ8TDB6 740 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 SYNDIG1Q9H7V2 258 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 EIF2B3Q9NR50 452 aaKnown RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 IL1RAPL1Q9NZN1 696 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 LRIT1Q9P2V4 623 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 FEZ2Q9UHY8 353 aaPredicted RBP12.25□□□□□ -0.45
APTX-220ENST00000476858 MSRB2Q9Y3D2 182 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 NEUROG3Q9Y4Z2 214 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 SAR1BQ9Y6B6 198 aa12.25□□□□□ -0.45
APTX-220ENST00000476858 H7C0S8 307 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
APTX-220ENST00000476858 VEGFDO43915 354 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 OR1I1O60431 355 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 PPFIA2O75334 1257 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 POP7O75817 140 aaKnown RBP12.24□□□□□ -0.45
APTX-220ENST00000476858 TRIM16O95361 564 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 MT-CO3P00414 261 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 GOT2P00505 430 aaKnown RBP12.24□□□□□ -0.45
APTX-220ENST00000476858 NUDT7P0C024 238 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 TPSB2P20231 275 aa12.24□□□□□ -0.45
APTX-220ENST00000476858 MSNP26038 577 aaKnown RBP12.24□□□□□ -0.45
APTX-220ENST00000476858 AKT1P31749 480 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms