RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 TEX26Q8N6G2 289 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 FDCSPQ8NFU4 85 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 ADAMTS17Q8TE56 1095 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 NSMCE1Q8WV22 266 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 ZDHHC12Q96GR4 267 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 SLC41A2Q96JW4 573 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 C5orf34Q96MH7 638 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 OR2AG1Q9H205 316 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 FAM83DQ9H4H8 585 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 SLC40A1Q9NP59 571 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 NT5MQ9NPB1 228 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 TAS2R14Q9NYV8 317 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 SEMA5BQ9P283 1151 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 EPHA6Q9UF33 1036 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 SLC23A2Q9UGH3 650 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 FARSAQ9Y285 508 aaKnown RBP11.18□□□□□ -0.62
BRCA1-213ENST00000476777 PCNX1Q96RV3 2341 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 IGHV5-51A0A0C4DH38 117 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 SSU72P8A0A1W2PR75 194 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 TMEM191CA6NGB0 347 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 H3BRJ5 948 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 KRT38O76015 456 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 RNF8O76064 485 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 BRAFP15056 766 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 PPP1CAP62136 330 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 GPR18Q14330 331 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 DPYSL2Q16555 572 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF648Q5T619 568 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-213ENST00000476777 ALG1LQ6GMV1 187 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 CYB5D1Q6P9G0 228 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF517Q6ZMY9 492 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-213ENST00000476777 POLNQ7Z5Q5 900 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 BPHLQ86WA6 291 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-213ENST00000476777 HPS6Q86YV9 775 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 RHOT1Q8IXI2 618 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 SNRNP40Q96DI7 357 aaKnown RBP11.17□□□□□ -0.62
BRCA1-213ENST00000476777 NUDT9Q9BW91 350 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
BRCA1-213ENST00000476777 TRIM7Q9C029 511 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 RAB33BQ9H082 229 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 ARFGAP3Q9NP61 516 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 POT1Q9NUX5 634 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 PARVAQ9NVD7 372 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 CHKBQ9Y259 395 aa11.17□□□□□ -0.62
BRCA1-213ENST00000476777 C1orf232A0A0U1RR37 186 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 RGSL1A5PLK6 1076 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 OR52A4PA6NMU1 304 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 GPR89AB7ZAQ6 455 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 CHUKO15111 745 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 EBLN1P0CF75 366 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 GPR89BP0CG08 455 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 PRF1P14222 555 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 IL1R2P27930 398 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 DSC2Q02487 901 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 ITKQ08881 620 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 KRT31Q15323 416 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 SEPT7Q16181 437 aaKnown RBP11.16□□□□□ -0.62
BRCA1-213ENST00000476777 PLA2G4EQ3MJ16 856 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 ZRANB3Q5FWF4 1079 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 IZUMO3Q5VZ72 239 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 MYO7BQ6PIF6 2116 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 CRTC3Q6UUV7 619 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 ABRAXAS1Q6UWZ7 409 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 CERS6Q6ZMG9 384 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 ADGRG6Q86SQ4 1221 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 SLC34A3Q8N130 599 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 SIDT2Q8NBJ9 832 aaKnown RBP11.16□□□□□ -0.62
BRCA1-213ENST00000476777 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 UBXN4Q92575 508 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 CSPG4P5Q96PW8 444 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 SMAD5Q99717 465 aaKnown RBP11.16□□□□□ -0.62
BRCA1-213ENST00000476777 POLR1EQ9GZS1 481 aaKnown RBP11.16□□□□□ -0.62
BRCA1-213ENST00000476777 TRIM39Q9HCM9 518 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 WASH6PQ9NQA3 447 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 ASF1BQ9NVP2 202 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 DTLQ9NZJ0 730 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 DNAJC16Q9Y2G8 782 aa11.16□□□□□ -0.62
BRCA1-213ENST00000476777 MED13LQ71F56 2210 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 CROCCQ5TZA2 2017 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ANKUB1A6NFN9 424 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 PDZK1P1A8MUH7 402 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF185O15231 689 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 CPNE3O75131 537 aaKnown RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 MTA2O94776 668 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 TMEM63AO94886 807 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ATP1A3P13637 1013 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF7P17097 686 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 CES1P23141 567 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 RPL10P27635 214 aaKnown RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ARL4AP40617 200 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ITGA1P56199 1179 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 RPL26P61254 145 aaKnown RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 PDE1BQ01064 536 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ACY1Q03154 408 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 GPS2Q13227 327 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 SMTNL2Q2TAL5 461 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms