RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 BEND7Q8N7W2 519 aaPredicted RBP10.08□□□□□ -0.8
CCM2-208ENST00000476594 FAM71DQ8N9W8 422 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 DDHD1Q8NEL9 900 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 OR4D9Q8NGE8 314 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 PTCD2Q8WV60 388 aaKnown RBP10.08□□□□□ -0.8
CCM2-208ENST00000476594 EID2BQ96D98 161 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 DCUN1D1Q96GG9 259 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 FOXP3Q9BZS1 431 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 B3GNT4Q9C0J1 378 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 IL26Q9NPH9 171 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 POT1Q9NUX5 634 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 ATXN7L1Q9ULK2 861 aaPredicted RBP10.08□□□□□ -0.8
CCM2-208ENST00000476594 PRKAB1Q9Y478 270 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 PCDHGA7Q9Y5G6 932 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 SLC30A1Q9Y6M5 507 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 ZZEF1O43149 2961 aa10.08□□□□□ -0.8
CCM2-208ENST00000476594 IGHV1OR21-1A0A087WYE8 117 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 LILRA5A6NI73 299 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 EIF4E1BA6NMX2 242 aaKnown RBP10.07□□□□□ -0.8
CCM2-208ENST00000476594 F8W8V4 182 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 AURKAO14965 403 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 MSNP26038 577 aaKnown RBP10.07□□□□□ -0.8
CCM2-208ENST00000476594 ADRA1AP35348 466 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 UGT1A5P35504 534 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 FDFT1P37268 417 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 PDX1P52945 283 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 TMPRSS3P57727 454 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ZFP36L1Q07352 338 aaKnown RBP10.07□□□□□ -0.8
CCM2-208ENST00000476594 SQSTM1Q13501 440 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 AADACL2Q6P093 401 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 TMEM71Q6P5X7 295 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ZNF449Q6P9G9 518 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 C4orf22Q6V702 233 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 WASH2PQ6VEQ5 465 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 AMZ2Q86W34 360 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 SLITRK4Q8IW52 837 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 LRRC8AQ8IWT6 810 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 CCDC89Q8N998 374 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 AGBL5Q8NDL9 886 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 SLC35B2Q8TB61 432 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ZNF398Q8TD17 642 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 PATE1Q8WXA2 126 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 CXorf40BQ96DE9 158 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 FAM118BQ9BPY3 351 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ASB8Q9H765 288 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 VPS37BQ9H9H4 285 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 UCK1Q9HA47 277 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ARNT2Q9HBZ2 717 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ARFGAP3Q9NP61 516 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ASCL3Q9NQ33 180 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 LZTFL1Q9NQ48 299 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 WASH6PQ9NQA3 447 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 CPNE7Q9UBL6 633 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 TBC1D29Q9UFV1 150 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 PISDQ9UG56 409 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 CRLS1Q9UJA2 301 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ZNF148Q9UQR1 794 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 DNAJC16Q9Y2G8 782 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ZKSCAN5Q9Y2L8 839 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 PLEKHM1Q9Y4G2 1056 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 PCDHB11Q9Y5F2 797 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 ARL5AQ9Y689 179 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 UNC13CQ8NB66 2214 aa10.07□□□□□ -0.8
CCM2-208ENST00000476594 DSPP15924 2871 aaKnown RBP10.07□□□□□ -0.8
CCM2-208ENST00000476594 CHD6Q8TD26 2715 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 TRBV23OR9-2A0A075B6M9 112 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 CDRT15L2A8MXV6 281 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 PPM1DO15297 605 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 NVLO15381 856 aaKnown RBP10.06□□□□□ -0.8
CCM2-208ENST00000476594 B4GAT1O43505 415 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 MTX2O75431 263 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 SRP72O76094 671 aaKnown RBP10.06□□□□□ -0.8
CCM2-208ENST00000476594 AP2A1O95782 977 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 IFNB1P01574 187 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 XRCC1P18887 633 aaPredicted RBP10.06□□□□□ -0.8
CCM2-208ENST00000476594 CD1CP29017 333 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 LIMK2P53671 638 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 RAB15P59190 212 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 NFATC2Q13469 925 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 CHRNA6Q15825 494 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 GPR33Q49SQ1 333 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
CCM2-208ENST00000476594 GPRC6AQ5T6X5 926 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 AGAP9Q5VTM2 703 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 CYB5D1Q6P9G0 228 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 KLHL35Q6PF15 583 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 WDR74Q6RFH5 385 aaPredicted RBP10.06□□□□□ -0.8
CCM2-208ENST00000476594 USP53Q70EK8 1073 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 B3GNT8Q7Z7M8 397 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 PDZD3Q86UT5 571 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 SLC13A5Q86YT5 568 aaPredicted RBP10.06□□□□□ -0.8
CCM2-208ENST00000476594 PLXDC1Q8IUK5 500 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 SPACA3Q8IXA5 215 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 DNAAF3Q8N9W5 541 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 OR4K2Q8NGD2 314 aa10.06□□□□□ -0.8
CCM2-208ENST00000476594 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms