RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR8H2Q8N162 312 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SMG8Q8ND04 991 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SLAIN1Q8ND83 568 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF555Q8NEP9 628 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 OR52B6Q8NGF0 335 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 RDH11Q8TC12 318 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KAT2AQ92830 837 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DGCR14Q96DF8 476 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DMRTB1Q96MA1 342 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 NAT9Q9BTE0 207 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DPY30Q9C005 99 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SACM1LQ9NTJ5 587 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SF3B1O75533 1304 aaKnown RBP eCLIP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MAST2Q6P0Q8 1798 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CABIN1Q9Y6J0 2220 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ZNFX1Q9P2E3 1918 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 A0A1B0GTL3 188 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 A6NHS1 94 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CABYRO75952 493 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FESP07332 822 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 PRKCHP24723 683 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GABRB3P28472 473 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KCNC1P48547 511 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF177Q13360 481 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CBX2Q14781 532 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FAM174BQ3ZCQ3 159 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 FGD3Q5JSP0 725 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SAMD4BQ5PRF9 694 aaKnown RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TMEM236Q5W0B7 351 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LRRC8DQ7L1W4 858 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TAS1R1Q7RTX1 841 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 PLPPR4Q7Z2D5 763 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TMEM110Q86TL2 294 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SETD3Q86TU7 594 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 CAMK1DQ8IU85 385 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF398Q8TD17 642 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SH3KBP1Q96B97 665 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 LRRC39Q96DD0 335 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 RTKNQ9BST9 563 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 SLC25A23Q9BV35 468 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM15Q9C019 465 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GBA3Q9H227 469 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MMADHCQ9H3L0 296 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-204ENST00000476379 GID8Q9NWU2 228 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 ARL15Q9NXU5 204 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 TAS2R13Q9NYV9 303 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 MALT1Q9UDY8 824 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 KIAA1257Q9ULG3 409 aa4.95□□□□□ -1.62
CCDC39-204ENST00000476379 DOCK1Q14185 1865 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TYW5A2RUC4 315 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 A6NL46 340 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 C2orf81A6NN90 581 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 K7ERQ8 282 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 BIRC5O15392 142 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 VPS26AO75436 327 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 WFS1O76024 890 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TMCC1O94876 653 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TGDSO95455 350 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 LBPP18428 481 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 OR1D2P34982 312 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MTHFRP42898 656 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 GLUD2P49448 558 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 HTR6P50406 440 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CCT8P50990 548 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RENBPP51606 427 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MRPS6P82932 125 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 SULT2A1Q06520 285 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZCCHC8Q6NZY4 707 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CHSY3Q70JA7 882 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 AHSA2Q719I0 299 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 PATL1Q86TB9 770 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RTN4RL1Q86UN2 441 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 GATAD2AQ86YP4 633 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZDHHC13Q8IUH4 622 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZC3H7AQ8IWR0 971 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 KRTCAP2Q8N6L1 136 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF614Q8N883 585 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 OR10T2Q8NGX3 314 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ACTRT2Q8TDY3 377 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 DNAJA3Q96EY1 480 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TSPAN17Q96FV3 270 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 HSFY1Q96LI6 401 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 SERPINB11Q96P15 392 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ADI1Q9BV57 179 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CLPBQ9H078 707 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ELOVL6Q9H5J4 265 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ABCB9Q9NP78 766 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MAP3K20Q9NYL2 800 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RAPGEFL1Q9UHV5 662 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ANAPC2Q9UJX6 822 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MKL2Q9ULH7 1088 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 SH3GLB1Q9Y371 365 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 C7orf72A4D263 438 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 I6L893 689 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MATN2O00339 956 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RBP1P09455 135 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 BMP1P13497 986 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CNTFP26441 200 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ATP6V1E1P36543 226 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms