RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 RECQL5O94762 991 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-210ENST00000475329 OR56A5P0C7T3 313 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 ATP5F1P24539 256 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-210ENST00000475329 CLCN7P51798 805 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 COPAP53621 1224 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 IL2P60568 153 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 B4GALNT1Q00973 533 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 OCRLQ01968 901 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 CREB5Q02930 508 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 HSF5Q4G112 596 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-210ENST00000475329 LDLRAP1Q5SW96 308 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 KIAA1211LQ6NV74 962 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 SPNS2Q8IVW8 549 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 CLDN19Q8N6F1 224 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 ANKS4BQ8N8V4 417 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 TXNDC5Q8NBS9 432 aaKnown RBP13.58□□□□□ -0.24
TRAF4-210ENST00000475329 FAM3CQ92520 227 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 INPP5DQ92835 1189 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 PTERQ96BW5 349 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 LINGO1Q96FE5 620 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 PANX3Q96QZ0 392 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 TFB2MQ9H5Q4 396 aaKnown RBP13.58□□□□□ -0.24
TRAF4-210ENST00000475329 THAP1Q9NVV9 213 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 TMPRSS11EQ9UL52 423 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 ANKRD12Q6UB98 2062 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 F5P12259 2224 aa13.58□□□□□ -0.24
TRAF4-210ENST00000475329 SZT2Q5T011 3432 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 A0A1W2PP55 124 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 EBAG9O00559 213 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 DLX3O60479 287 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 MAGEC1O60732 1142 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SMIM24O75264 130 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 AP2A2O94973 939 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SLC25A14O95258 325 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-210ENST00000475329 TRIM16O95361 564 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 DNTTP04053 509 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 ITGB6P18564 788 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 MSH3P20585 1137 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 COL9A1P20849 921 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SLC1A6P48664 564 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 RGS4P49798 205 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 DPTQ07507 201 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 EOGTQ5NDL2 527 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 IER5LQ5T953 404 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 CES4AQ5XG92 561 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-210ENST00000475329 ISCA2Q86U28 154 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 CRLF3Q8IUI8 442 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 PHYKPLQ8IUZ5 450 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SLC22A9Q8IVM8 553 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 CPNE9Q8IYJ1 553 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 ZBTB2Q8N680 514 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 OR6Y1Q8NGX8 325 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 RHEBL1Q8TAI7 183 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 LKAAEAR1Q8TD35 194 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 PPP4R1Q8TF05 950 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 GLYATL1Q969I3 302 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 KIAA1191Q96A73 305 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SGF29Q96ES7 293 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 TRIM55Q9BYV6 548 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 SPATS2LQ9NUQ6 558 aaKnown RBP13.57□□□□□ -0.24
TRAF4-210ENST00000475329 KCTD5Q9NXV2 234 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 KLHL14Q9P2G3 628 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 KLHL42Q9P2K6 505 aa13.57□□□□□ -0.24
TRAF4-210ENST00000475329 A0A1W2PQF6 199 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 NPEPPSL1A6NEC2 478 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 LOC730098B7Z3J9 87 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 QSOX1O00391 747 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 DLL1O00548 723 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 MAN2B1O00754 1011 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 KERAO60938 352 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 RNASEH2AO75792 299 aaKnown RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 PCDH8O95206 1070 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 TGDSO95455 350 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 TSPAN12O95859 305 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 ATP1B2P14415 290 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 TAS2R38P59533 333 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 DNAJB13P59910 316 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 ABCE1P61221 599 aaKnown RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 SF3A3Q12874 501 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■□□ 14.8
TRAF4-210ENST00000475329 OVGP1Q12889 678 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 OR4D1Q15615 310 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 CRY1Q16526 586 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 TTLL9Q3SXZ7 439 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 TTC31Q49AM3 519 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 RAET1GQ6H3X3 334 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 NLRP8Q86W28 1048 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 SPATS2Q86XZ4 545 aaKnown RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 GANCQ8TET4 914 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 PDLIM5Q96HC4 596 aaKnown RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 PLCD4Q9BRC7 762 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 GATA5Q9BWX5 397 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 ZCCHC2Q9C0B9 1178 aaKnown RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 MKRN2Q9H000 416 aaKnown RBP13.56□□□□□ -0.24
TRAF4-210ENST00000475329 NPHS2Q9NP85 383 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms