RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CTAGE4Q8IX94 777 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 PDIK1LQ8N165 341 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 MPP5Q8N3R9 675 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 OTUD6BQ8N6M0 293 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 RASGEF1AQ8N9B8 481 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 OR4L1Q8NH43 312 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 BAHD1Q8TBE0 780 aaPredicted RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 GPBAR1Q8TDU6 330 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 HEXDCQ8WVB3 486 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 MFSD3Q96ES6 412 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 APOLD1Q96LR9 279 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 KIFC1Q9BW19 673 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 ZDHHC3Q9NYG2 299 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 NCKIPSDQ9NZQ3 722 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 SIRPGQ9P1W8 387 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 GULP1Q9UBP9 304 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 PLEKHM1Q9Y4G2 1056 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 TRBV5-4A0A0C4DH59 114 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 SPAARA0A1B0GVQ0 90 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 OR2AG2A6NM03 316 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 AGAP14A8MT82 685 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 CHUKO15111 745 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 CKMT2P17540 419 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 VCLP18206 1134 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 ACRV1P26436 265 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 FOXN2P32314 431 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 PPARGP37231 505 aaPredicted RBP12.25□□□□□ -0.45
DDX56-209ENST00000473924 MAGEA3P43357 314 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 RPL21P46778 160 aaKnown RBP12.25□□□□□ -0.45
DDX56-209ENST00000473924 RPIAP49247 311 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 DUSP3P51452 185 aaPredicted RBP12.25□□□□□ -0.45
DDX56-209ENST00000473924 PROX2Q3B8N5 592 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 BBS9Q3SYG4 887 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 CCDC157Q569K6 752 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 FNBP1LQ5T0N5 605 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 LYPLAL1Q5VWZ2 237 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 TMEM220Q6QAJ8 160 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 NRROSQ86YC3 692 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 CEP112Q8N8E3 955 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 ZNF669Q96BR6 464 aaPredicted RBP12.25□□□□□ -0.45
DDX56-209ENST00000473924 SGF29Q96ES7 293 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 ZNF514Q96K75 400 aaPredicted RBP12.25□□□□□ -0.45
DDX56-209ENST00000473924 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 KLC4Q9NSK0 619 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 TREX1Q9NSU2 369 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 CATSPERZQ9NTU4 200 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 TAAR2Q9P1P5 351 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 KCNK6Q9Y257 313 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 PCYT1BQ9Y5K3 369 aaPredicted RBP12.25□□□□□ -0.45
DDX56-209ENST00000473924 RPS6KL1Q9Y6S9 549 aa12.25□□□□□ -0.45
DDX56-209ENST00000473924 FAM237BA0A1B0GVD1 139 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 B4DGG1 531 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 SNX2O60749 519 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 VAPBO95292 243 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 POLBP06746 335 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 ATP1B2P14415 290 aaPredicted RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 ZNF7P17097 686 aaPredicted RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 COL5A1P20908 1838 aaPredicted RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 ARL4CP56559 192 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 DHX9Q08211 1270 aaKnown RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 DNAJC3Q13217 504 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 BIRC2Q13490 618 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 NR0B2Q15466 257 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 DBN1Q16643 649 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 HIF1AQ16665 826 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 ANKRD20A4Q4UJ75 823 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 AARS2Q5JTZ9 985 aaKnown RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 CERS6Q6ZMG9 384 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 GLRX5Q86SX6 157 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 PIANPQ8IYJ0 282 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 ARL10Q8N8L6 244 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 ZDHHC1Q8WTX9 485 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 STAMBPL1Q96FJ0 436 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 SIGLEC10Q96LC7 697 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 BOCQ9BWV1 1114 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 SPATS2LQ9NUQ6 558 aaKnown RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 WHRNQ9P202 907 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 PLXNB3Q9ULL4 1909 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
DDX56-209ENST00000473924 DNAJC16Q9Y2G8 782 aa12.24□□□□□ -0.45
DDX56-209ENST00000473924 CPED1A4D0V7 1026 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 CD3EAPO15446 510 aaKnown RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 POP7O75817 140 aaKnown RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 FTH1P19P0C7X4 201 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 CKMT1AP12532 417 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 MYF5P13349 255 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 PGAM1P18669 254 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 PMLP29590 882 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 PBLDP30039 288 aaPredicted RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 NSG1P42857 185 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 TTPAP49638 278 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 CTSCP53634 463 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 B4GALNT1Q00973 533 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 SLC7A5Q01650 507 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 ITIH4Q14624 930 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms