RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 PHYKPLQ8IUZ5 450 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 BBS5Q8N3I7 341 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 POLR1EQ9GZS1 481 aaKnown RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 STN1Q9H668 368 aaKnown RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 RMI1Q9H9A7 625 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 UCK1Q9HA47 277 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 SLC40A1Q9NP59 571 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 OR5K4A6NMS3 321 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 MATN3O15232 486 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 PYGLP06737 847 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 EBLN1P0CF75 366 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF7P17097 686 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-209ENST00000473421 DESP17661 470 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 NELFEP18615 380 aaKnown RBP12.39□□□□□ -0.43
TRAF4-209ENST00000473421 PTGIRP43119 386 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 CAPZBP47756 277 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 PGDP52209 483 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF135P52742 658 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-209ENST00000473421 GALNT3Q14435 633 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 UGT8Q16880 541 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAF4-209ENST00000473421 BOLA3Q53S33 107 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-209ENST00000473421 FBXO38Q6PIJ6 1188 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 C11orf96Q7Z7L8 435 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 PPP1R3BQ86XI6 285 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 CNTD1Q8N815 330 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 GPR150Q8NGU9 434 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 PRR7Q8TB68 274 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 NSMCE1Q8WV22 266 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 PPM1MQ96MI6 270 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 SLC25A23Q9BV35 468 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 ING2Q9H160 280 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 EPB41L1Q9H4G0 881 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 TRIM39Q9HCM9 518 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 ERRFI1Q9UJM3 462 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-209ENST00000473421 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
TRAF4-209ENST00000473421 DOPEY1Q5JWR5 2465 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 WIPF3A6NGB9 483 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 PDZK1P1A8MUH7 402 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 AURKAO14965 403 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 TOX3O15405 576 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-209ENST00000473421 SLC25A14O95258 325 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-209ENST00000473421 SLC4A1P02730 911 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 CCNYL3P0C7X3 344 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 SLC2A4P14672 509 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 PTPN4P29074 926 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 CD86P42081 329 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 GBE1Q04446 702 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 GPS2Q13227 327 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 TUBB3Q13509 450 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 INSCQ1MX18 579 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 ANKRD20A8PQ5CZ79 823 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 PAPD7Q5XG87 772 aaKnown RBP12.38□□□□□ -0.43
TRAF4-209ENST00000473421 JMJD6Q6NYC1 403 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-209ENST00000473421 ABRAXAS1Q6UWZ7 409 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 TRIM48Q8IWZ4 208 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 RBMXL3Q8N7X1 1067 aaKnown RBP12.38□□□□□ -0.43
TRAF4-209ENST00000473421 FDCSPQ8NFU4 85 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 SLC41A2Q96JW4 573 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 TRIB3Q96RU7 358 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 MAP3K3Q99759 626 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 NUDT9Q9BW91 350 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 SPATA16Q9BXB7 569 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 CEP41Q9BYV8 373 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 SEMA5BQ9P283 1151 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 CSMD1Q96PZ7 3565 aa12.38□□□□□ -0.43
TRAF4-209ENST00000473421 ANKRD66B4E2M5 251 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 KCNK1O00180 336 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 GPR39O43194 453 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 RECKO95980 971 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 TPM2P07951 284 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 HNRNPH3P31942 346 aaKnown RBP12.37□□□□□ -0.43
TRAF4-209ENST00000473421 NOP2P46087 812 aaKnown RBP12.37□□□□□ -0.43
TRAF4-209ENST00000473421 ZNF165P49910 485 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 ITGA1P56199 1179 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 ZBTB17Q13105 803 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 DPYSL3Q14195 570 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 PAFAH1B3Q15102 231 aaKnown RBP12.37□□□□□ -0.43
TRAF4-209ENST00000473421 GPR19Q15760 415 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 FAM83HQ6ZRV2 1179 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-209ENST00000473421 TMEM151BQ8IW70 566 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 PQLC3Q8N755 202 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 ADAMTS17Q8TE56 1095 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 NAT14Q8WUY8 206 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 TEKT4Q8WW24 435 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 GLYATL1Q969I3 302 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 NRTNQ99748 197 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 MLPHQ9BV36 600 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-209ENST00000473421 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 EPHA6Q9UF33 1036 aa12.37□□□□□ -0.43
TRAF4-209ENST00000473421 PCDHGA9Q9Y5G4 932 aaKnown RBP12.37□□□□□ -0.43
TRAF4-209ENST00000473421 A6NL46 340 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 C21orf140B9A014 251 aa12.36□□□□□ -0.43
TRAF4-209ENST00000473421 MASP2O00187 686 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms