RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-222ENST00000473373 CHRNA6Q15825 494 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 ATP13A5Q4VNC0 1218 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 NKAIN2Q5VXU1 208 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 PPP1R21Q6ZMI0 780 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 B3GNT8Q7Z7M8 397 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 ADGRG6Q86SQ4 1221 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 LRRC8AQ8IWT6 810 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 CCDC89Q8N998 374 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 DNAAF3Q8N9W5 541 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 AVL9Q8NBF6 648 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 OR4K2Q8NGD2 314 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 EID2BQ96D98 161 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 CXorf40BQ96DE9 158 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 DCUN1D1Q96GG9 259 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 LIN37Q96GY3 246 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-222ENST00000473373 HES6Q96HZ4 224 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 VPS35Q96QK1 796 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-222ENST00000473373 ASB8Q9H765 288 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 NFKBIL1Q9UBC1 381 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-222ENST00000473373 FAM8A1Q9UBU6 413 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 LOXL2Q9Y4K0 774 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 SLC30A1Q9Y6M5 507 aa11.38□□□□□ -0.59
CPNE1-222ENST00000473373 BPTFQ12830 3046 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 KIR2DS5A0A0G2JLQ3 304 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 A0A0G2JNG1 304 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 C5orf60A6NFR6 353 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 OR2AG2A6NM03 316 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 KIR2DS3K7RE56 304 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 PPM1DO15297 605 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 KLK10O43240 276 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A9O60656 530 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 RALBP11234 206 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 F3P13726 295 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 HGFP14210 728 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A6P19224 532 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 IDSP22304 550 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A1P22309 533 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A4P22310 534 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 CSTF2P33240 577 aaKnown RBP eCLIP11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A3P35503 534 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A5P35504 534 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 HADHAP40939 763 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
CPNE1-222ENST00000473373 TMEM115Q12893 351 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-222ENST00000473373 OLIG2Q13516 323 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 KIR2DS5Q14953 304 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 LONRF2Q1L5Z9 754 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 PARP6Q2NL67 630 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 DET1Q7L5Y6 550 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 TTC30BQ8N4P2 665 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 SNIP1Q8TAD8 396 aaKnown RBP11.37□□□□□ -0.59
CPNE1-222ENST00000473373 ZNF398Q8TD17 642 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UBE2Q2Q8WVN8 375 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 MAIP1Q8WWC4 291 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 ATG4AQ8WYN0 398 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 SLC39A7Q92504 469 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UBL7Q96S82 380 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-222ENST00000473373 LRRC40Q9H9A6 602 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 PRDM8Q9NQV8 689 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 IL17CQ9P0M4 197 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 TBC1D29Q9UFV1 150 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 FKBPLQ9UIM3 349 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 PCDHGA8Q9Y5G5 932 aa11.37□□□□□ -0.59
CPNE1-222ENST00000473373 A8MU76 341 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 CFAP99D6REC4 459 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 B4GAT1O43505 415 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 ITGA2BP08514 1039 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 AMD1P17707 334 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 ITGALP20701 1170 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 MPSTP25325 297 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 RPL10P27635 214 aaKnown RBP11.36□□□□□ -0.59
CPNE1-222ENST00000473373 CCKBRP32239 447 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 GPLD1P80108 840 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 B4GALNT1Q00973 533 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 PTPRCAPQ14761 206 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 ZRANB3Q5FWF4 1079 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 TMEM220Q6QAJ8 160 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 TAS2R42Q7RTR8 314 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 LINC00523Q86TU6 105 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 FAM129CQ86XR2 697 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 RCBTB1Q8NDN9 531 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 TRIM58Q8NG06 486 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 C1orf54Q8WWF1 131 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 NCSTNQ92542 709 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 TMEM159Q96B96 161 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-222ENST00000473373 CCDC74BQ96LY2 380 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 SLC46A1Q96NT5 459 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 DPYSL5Q9BPU6 564 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 NUDT22Q9BRQ3 303 aa11.36□□□□□ -0.59
CPNE1-222ENST00000473373 TIMM29Q9BSF4 260 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms