RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 MATN4O95460 622 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 RHOQP17081 205 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 APLP1P51693 650 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 TBX4P57082 545 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 ECT2LQ008S8 904 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 NFYCQ13952 458 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 SEMA3AQ14563 771 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 OFCC1Q8IZS5 231 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 VPS33AQ96AX1 596 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 FBXL20Q96IG2 436 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 RPL10LQ96L21 214 aaKnown RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 C1orf74Q96LT6 269 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 CEP295NLQ96MC4 621 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 SDR39U1Q9NRG7 319 aaPredicted RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 FKBP14Q9NWM8 211 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 ABI2Q9NYB9 513 aaPredicted RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 FNIP2Q9P278 1114 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 ANKMY1Q9P2S6 941 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 TDRD15B5MCY1 1934 aaKnown RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 A0A1B0GTL3 188 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 EI24O14681 340 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 CLOCKO15516 846 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 CASP2P42575 452 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 BMXP51813 675 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 TIAL1Q01085 375 aaKnown RBP eCLIP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 CLCQ05315 142 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 MAP2K5Q13163 448 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 GALNT3Q14435 633 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 SF3B4Q15427 424 aaKnown RBP eCLIP13.88□□□□□ -0.191e-8■■■■■ 32
ABCF3-210ENST00000473311 SLC36A3Q495N2 470 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 FUT11Q495W5 492 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 TIGD2Q4W5G0 525 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 MS4A13Q5J8X5 152 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 PGBD5Q8N414 524 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 TRPV3Q8NET8 790 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 ARRDC2Q8TBH0 407 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 ATOH8Q96SQ7 321 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 MUC3BQ9H195 1237 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 RNF112Q9ULX5 631 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 CDC14AQ9UNH5 594 aa13.88□□□□□ -0.19
ABCF3-210ENST00000473311 RBMX2Q9Y388 322 aaKnown RBP13.88□□□□□ -0.19
ABCF3-210ENST00000473311 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 M0QX08 132 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 NCK1P16333 377 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 HOXC8P31273 242 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 GSK3BP49841 420 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 BLOC1S3Q6QNY0 202 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 DCP1BQ8IZD4 617 aaKnown RBP13.87□□□□□ -0.19
ABCF3-210ENST00000473311 FBXO39Q8N4B4 442 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 SEPT8Q92599 483 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 ALG2Q9H553 416 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-210ENST00000473311 CATSPERZQ9NTU4 200 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 TMEM248Q9NWD8 314 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 FAM50BQ9Y247 325 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 TLR6Q9Y2C9 796 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 SYCE1LA8MT33 242 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 M0QZQ0 153 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 GMNNO75496 209 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 CHRNA1P02708 482 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 GPIP06744 558 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 PRSS56P0CW18 603 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 KCNK10P57789 538 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 LCP2Q13094 533 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 SLC39A12Q504Y0 691 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 TMTC4Q5T4D3 741 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 MSANTD2Q6P1R3 559 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 CIR1Q86X95 450 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-210ENST00000473311 RHEBL1Q8TAI7 183 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 KCTD14Q9BQ13 255 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-210ENST00000473311 RIC8BQ9NVN3 520 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 DAPK2Q9UIK4 370 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 PCDHA9Q9Y5H5 950 aa13.87□□□□□ -0.19
ABCF3-210ENST00000473311 LOC105371267A0A1B0GV96 52 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 LOC285095A0A1B0GVY8 99 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 MZF1P28698 734 aaPredicted RBP13.86□□□□□ -0.19
ABCF3-210ENST00000473311 YWHAHQ04917 246 aaPredicted RBP13.86□□□□□ -0.19
ABCF3-210ENST00000473311 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 ITGADQ13349 1161 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 C9orf131Q5VYM1 1079 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 OR4L1Q8NH43 312 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 TMEM125Q96AQ2 219 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 SLC39A13Q96H72 371 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 AARSD1Q9BTE6 412 aaKnown RBP13.86□□□□□ -0.19
ABCF3-210ENST00000473311 TRIM54Q9BYV2 358 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 TFB2MQ9H5Q4 396 aaKnown RBP13.86□□□□□ -0.19
ABCF3-210ENST00000473311 ANGPTL3Q9Y5C1 460 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 V9GYQ6 96 aa13.86□□□□□ -0.19
ABCF3-210ENST00000473311 NCF1BA6NI72 391 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms