RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PPCSQ9HAB8 311 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 PLAC1Q9HBJ0 212 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 FBXO6Q9NRD1 293 aaPredicted RBP16.66■□□□□ 0.26
CCM2-205ENST00000472223 ATXN10Q9UBB4 475 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 CORO1CQ9ULV4 474 aaPredicted RBP16.66■□□□□ 0.26
CCM2-205ENST00000472223 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 GPR34Q9UPC5 381 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 ANKRD6Q9Y2G4 727 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 CRYL1Q9Y2S2 319 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 GON4LQ3T8J9 2241 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 KLHL33A6NCF5 533 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 E5RI56 91 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 KHNYNO15037 678 aaKnown RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 KMOO15229 486 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 GRID2O43424 1007 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 DFNA5O60443 496 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 S1PR4O95977 384 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 FTH1P02794 183 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 ESR1P03372 595 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 RETP07949 1114 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 CTSEP14091 401 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 FMO4P31512 558 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 SPRP35270 261 aaPredicted RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 GP5P40197 560 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 MPLP40238 635 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 SLC12A2P55011 1212 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 CSE1LP55060 971 aaKnown RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 SRP54P61011 504 aaKnown RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 SEMA3AQ14563 771 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 PEAR1Q5VY43 1037 aaPredicted RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 TMEM220Q6QAJ8 160 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 DET1Q7L5Y6 550 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 RD3Q7Z3Z2 195 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 LRRTM4Q86VH4 590 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 MRRFQ96E11 262 aaKnown RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 ZDHHC5Q9C0B5 715 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 ARRDC1-AS1Q9H2J1 176 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 CARS2Q9HA77 564 aaKnown RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 CYP4F12Q9HCS2 524 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 TMEM74BQ9NUR3 256 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 TMPRSS11EQ9UL52 423 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 SLC17A4Q9Y2C5 497 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 GPSM3Q9Y4H4 160 aa16.65■□□□□ 0.26
CCM2-205ENST00000472223 DNMT3AQ9Y6K1 912 aaPredicted RBP16.65■□□□□ 0.26
CCM2-205ENST00000472223 PLXNB3Q9ULL4 1909 aa16.64■□□□□ 0.26
CCM2-205ENST00000472223 TNRC6BQ9UPQ9 1833 aaKnown RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 SDK1Q7Z5N4 2213 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 IGLV3-16A0A075B6K0 115 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 A0A1B0GVT2 93 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 PRSS38A1L453 326 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 TMEM202A6NGA9 273 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 OR2AG2A6NM03 316 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 KPNA5O15131 536 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 NUAK1O60285 661 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 HAUS5O94927 633 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 AHSGP02765 367 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 WNT1P04628 370 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 CEACAM5P06731 702 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 GSTM1P09488 218 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 ZNF8P17098 575 aaPredicted RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 CHRM3P20309 590 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 RPS3P23396 243 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCM2-205ENST00000472223 GNPDA1P46926 289 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 ARRB1P49407 418 aaPredicted RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 SERPINB9P50453 376 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 ATXN3P54252 364 aaPredicted RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 ADARP55265 1226 aaKnown RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 NXPH1P58417 271 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 MPP1Q00013 466 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 GSTM4Q03013 218 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 TRIM61Q5EBN2 209 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 ZNF648Q5T619 568 aaPredicted RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 UGT3A1Q6NUS8 523 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 HID1Q8IV36 788 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 RASGEF1AQ8N9B8 481 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 SGF29Q96ES7 293 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 RUFY1Q96T51 708 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 ERVMER34-1Q9H9K5 563 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 DNAJC28Q9NX36 388 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 NCDNQ9UBB6 729 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 SUFUQ9UMX1 484 aa16.64■□□□□ 0.25
CCM2-205ENST00000472223 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
CCM2-205ENST00000472223 CXorf49A8MYA2 514 aaPredicted RBP16.63■□□□□ 0.25
CCM2-205ENST00000472223 OR1I1O60431 355 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 KCNJ13O60928 360 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 KRT38O76015 456 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 PKMP14618 531 aaKnown RBP16.63■□□□□ 0.25
CCM2-205ENST00000472223 CNTFP26441 200 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 POLD2P49005 469 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 HNRNPKP61978 463 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCM2-205ENST00000472223 SLC23A3Q6PIS1 610 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 CRTC3Q6UUV7 619 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 CROCCP2Q86T23 111 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 SLC22A18ASQ8N1D0 253 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 CLDN19Q8N6F1 224 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 GPATCH11Q8N954 259 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 LPGAT1Q92604 370 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 TSACCQ96A04 125 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms