RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ABCD3P28288 659 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 HOXC13P31276 330 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 KRT2P35908 639 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 PRCPP42785 496 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 CDC16Q13042 620 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 TMEM187Q14656 261 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 DUOXA1Q1HG43 343 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 SLC9C2Q5TAH2 1124 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 INO80CQ6PI98 192 aaPredicted RBP4.25□□□□□ -1.73
CD46-213ENST00000471987 PM20D2Q8IYS1 436 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 GBGT1Q8N5D6 347 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 PAF1Q8N7H5 531 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 ZNF689Q96CS4 500 aaPredicted RBP4.25□□□□□ -1.73
CD46-213ENST00000471987 PSD2Q9BQI7 771 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 WDR13Q9H1Z4 485 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 APOBEC3GQ9HC16 384 aaKnown RBP4.25□□□□□ -1.73
CD46-213ENST00000471987 SLC38A7Q9NVC3 462 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 DLGAP2Q9P1A6 1054 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 KIAA1210Q9ULL0 1709 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 A0A087X002 238 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 KANSL1LA0AUZ9 987 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 C15orf62A8K5M9 175 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 PEX14O75381 377 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 RARSP54136 660 aaKnown RBP4.24□□□□□ -1.73
CD46-213ENST00000471987 LMO4P61968 165 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 ZBED6P86452 979 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 TUBB2AQ13885 445 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 ZNF805Q5CZA5 627 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 EMC1Q8N766 993 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 ST8SIA4Q92187 359 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 PRMT6Q96LA8 375 aaPredicted RBP4.24□□□□□ -1.73
CD46-213ENST00000471987 EGFL8Q99944 293 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 SEMA3CQ99985 751 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 DCTN5Q9BTE1 182 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 TUBB2BQ9BVA1 445 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 STRA6Q9BX79 667 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 TRIM15Q9C019 465 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 RRN3Q9NYV6 651 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 COPG2Q9UBF2 871 aa4.24□□□□□ -1.73
CD46-213ENST00000471987 MRPS28Q9Y2Q9 187 aaKnown RBP4.24□□□□□ -1.73
CD46-213ENST00000471987 KDM3AQ9Y4C1 1321 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 SMCHD1A6NHR9 2005 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 A0A0J9YWU9 116 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 RRN3P2A6NIE6 340 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 WISP2O76076 250 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 KRT19P08727 400 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 CEACAM1P13688 526 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 XBP1P17861 261 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 SP100P23497 879 aaPredicted RBP4.23□□□□□ -1.73
CD46-213ENST00000471987 CTSCP53634 463 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 F2RL1P55085 397 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 DPCR1Q3MIW9 517 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 NSUN5P2Q63ZY6 315 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 MFSD6Q6ZSS7 791 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 SH2D5Q6ZV89 423 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 ARMC8Q8IUR7 673 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 SLC5A8Q8N695 610 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 HM13Q8TCT9 377 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 MMABQ96EY8 250 aaPredicted RBP4.23□□□□□ -1.73
CD46-213ENST00000471987 POM121L2Q96KW2 1035 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 SMC6Q96SB8 1091 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 TMEM39BQ9GZU3 492 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 PCDHB16Q9NRJ7 776 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 CWC15Q9P013 229 aaKnown RBP4.23□□□□□ -1.73
CD46-213ENST00000471987 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 RASAL2Q9UJF2 1139 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 SLC13A4Q9UKG4 626 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 KCNJ14Q9UNX9 436 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 CLIC4Q9Y696 253 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 DISP3Q9P2K9 1392 aa4.23□□□□□ -1.73
CD46-213ENST00000471987 ATP2A1O14983 1001 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 SYNCRIPO60506 623 aaKnown RBP4.22□□□□□ -1.73
CD46-213ENST00000471987 PAGE4O60829 102 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 SEC14L2O76054 403 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 MLYCDO95822 493 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 LIPFP07098 398 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 EPHA8P29322 1005 aaPredicted RBP4.22□□□□□ -1.73
CD46-213ENST00000471987 KCNJ10P78508 379 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 MRPS34P82930 218 aaKnown RBP4.22□□□□□ -1.73
CD46-213ENST00000471987 BIRC3Q13489 604 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 CCNG2Q16589 344 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 RAB6CQ53S08 254 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 SLC38A9Q8NBW4 561 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 SMARCE1Q969G3 411 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 FAM149B1Q96BN6 582 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 SLX1AQ9BQ83 275 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 RAB6CQ9H0N0 254 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 BARHL2Q9NY43 387 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 PAK5Q9P286 719 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 CNOT8Q9UFF9 292 aaKnown RBP4.22□□□□□ -1.73
CD46-213ENST00000471987 YIPF1Q9Y548 306 aa4.22□□□□□ -1.73
CD46-213ENST00000471987 STK36Q9NRP7 1315 aa4.21□□□□□ -1.73
CD46-213ENST00000471987 SLC25A12O75746 678 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 KCNK5O95279 499 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 BMP10O95393 424 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 CLPTM1O96005 669 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 LIFP15018 202 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 DPEP1P16444 411 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 ITGA3P26006 1051 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms