RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FBXO38Q6PIJ6 1188 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 PTRH1Q86Y79 214 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 LILRA3Q8N6C8 439 aaPredicted RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 BEND7Q8N7W2 519 aaPredicted RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 AGBL5Q8NDL9 886 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 RSC1A1Q92681 617 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 GLYATL1Q969I3 302 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 RTP4Q96DX8 246 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 ELMO2Q96JJ3 720 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 PPM1MQ96MI6 270 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 RUFY1Q96T51 708 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 APOL2Q9BQE5 337 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 MAK16Q9BXY0 300 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 GPR63Q9BZJ6 419 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 TSPY26PQ9H489 355 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 OSGEPL1Q9H4B0 414 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 DEF6Q9H4E7 631 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 MAGEE1Q9HCI5 957 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 TRIM39Q9HCM9 518 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 SARS2Q9NP81 518 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 KCTD5Q9NXV2 234 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 PKD2L2Q9NZM6 624 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 VPS18Q9P253 973 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 AMACRQ9UHK6 382 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 PSMD13Q9UNM6 376 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 RPL26L1Q9UNX3 145 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 REXO2Q9Y3B8 237 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 PCDHGA3Q9Y5H0 932 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 hCG_1818297A0A087WSY0 165 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 J3QKU1 62 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 HGSO14964 777 aaPredicted RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 SGTAO43765 313 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 SLC28A2O43868 658 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 RAD1O60671 282 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 TIAF1O95411 115 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 NDST3O95803 873 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 FURINP09958 794 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 PRSS56P0CW18 603 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 PRKAR1AP10644 381 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 RBL1P28749 1068 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 CSTF2P33240 577 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP48-207ENST00000471752 ARHGAP25P42331 645 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 MAGEA1P43355 309 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 PPM1FP49593 454 aaPredicted RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 MC2RQ01718 297 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 MSLNQ13421 630 aaPredicted RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 LRP8Q14114 963 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 SPARCL1Q14515 664 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 KCNAB1Q14722 419 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 TCEAL1Q15170 157 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 LRRC38Q5VT99 294 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 TMEM135Q86UB9 458 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 RHOT1Q8IXI2 618 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 CACNA2D3Q8IZS8 1091 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 NDUFAF2Q8N183 169 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 TRAM1L1Q8N609 369 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 RASGEF1AQ8N9B8 481 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 GPR150Q8NGU9 434 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 TGM7Q96PF1 710 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 LACRTQ9GZZ8 138 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 CARD9Q9H257 536 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 FAM96AQ9H5X1 160 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 STARD5Q9NSY2 213 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 SIDT1Q9NXL6 827 aaKnown RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 IL17CQ9P0M4 197 aa7.95□□□□□ -1.14
USP48-207ENST00000471752 CFAP20Q9Y6A4 193 aaKnown RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 ZFC3H1O60293 1989 aaKnown RBP7.95□□□□□ -1.14
USP48-207ENST00000471752 A0A0A6YYK5 440 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 RGSL1A5PLK6 1076 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 SOWAHDA6NJG2 315 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 OR2AG2A6NM03 316 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 B4E171 279 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 AKR1B15C9JRZ8 316 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 STMND1H3BQB6 276 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 SPOPO43791 374 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 POP7O75817 140 aaKnown RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 CDK14O94921 469 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 XRCC1P18887 633 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 NR1D1P20393 614 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 OAS2P29728 719 aaKnown RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 TSPAN7P41732 249 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 CDKN1CP49918 316 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 TMEM115Q12893 351 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 TRA2AQ13595 282 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP48-207ENST00000471752 GPR18Q14330 331 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 NFE2L1Q14494 772 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 IGFBP7Q16270 282 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 SKIDA1Q1XH10 827 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 ZNF569Q5MCW4 686 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 PRAMEF17Q5VTA0 474 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 FAM69BQ5VUD6 431 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 DUS1LQ6P1R4 473 aaKnown RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 TMEM220Q6QAJ8 160 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 WDR74Q6RFH5 385 aaPredicted RBP7.94□□□□□ -1.14
USP48-207ENST00000471752 FAM151BQ6UXP7 276 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 FAM92BQ6ZTR7 304 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 TMEM26Q6ZUK4 368 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 DET1Q7L5Y6 550 aa7.94□□□□□ -1.14
USP48-207ENST00000471752 PRICKLE2Q7Z3G6 844 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms