RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NR2F6P10588 404 aa13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RIDAP52758 137 aaKnown RBP13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TNK2Q07912 1038 aa13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZPBP2Q6X784 338 aa13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TNFAIP8L1Q8WVP5 186 aa13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PPM1MQ96MI6 270 aa13.16□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SPTBP11277 2137 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 A0A0J9YVX5 310 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 VITQ6UXI7 678 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BORCS8Q96FH0 119 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FCRL2Q96LA5 508 aaPredicted RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PRDM8Q9NQV8 689 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SH3BGRL2Q9UJC5 107 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PAGE1O75459 146 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CLEC3AO75596 197 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PSEN1P49768 467 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CLCN7P51798 805 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LARS2Q15031 903 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CHST9Q7L1S5 443 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR6K6Q8NGW6 343 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 B3GALT6Q96L58 329 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NPAS2Q99743 824 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CTPS2Q9NRF8 586 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ALPPL2P10696 532 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RRP1BQ14684 758 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CIR1Q86X95 450 aaPredicted RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AVL9Q8NBF6 648 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LCN9Q8WX39 176 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TAPBPLQ9BX59 468 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GRM6O15303 877 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NUAK1O60285 661 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BCAS1O75363 584 aaPredicted RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AP2A2O94973 939 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MAPK8P45983 427 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 EEF1A2Q05639 463 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DLG2Q15700 870 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C7orf57Q8NEG2 295 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AP3S1Q92572 193 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GFM1Q96RP9 751 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MRM3Q9HC36 420 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CRNNQ9UBG3 495 aaPredicted RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GNEQ9Y223 722 aaKnown RBP13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CACNA1CQ13936 2221 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR1I1O60431 355 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 IL12AP29459 219 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ALG1LQ6GMV1 187 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ANKRD46Q86W74 232 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR4K2Q8NGD2 314 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PORCNQ9H237 461 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RMI1Q9H9A7 625 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ING4Q9UNL4 249 aa13.15□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FPGTO14772 594 aa13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 POU2F1P14859 743 aa13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 INHBEP58166 350 aa13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PPP3R1P63098 170 aa13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ST3GAL4Q11206 333 aa13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GDF6Q6KF10 455 aaPredicted RBP13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CAPN13Q6MZZ7 669 aaPredicted RBP13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GMIPQ9P107 970 aa13.15□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 A8MUI8 341 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TULP3O75386 442 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCNDBP1O95273 360 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SHMT1P34896 483 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PCBP2Q15366 365 aaKnown RBP eCLIP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MYO19Q96H55 970 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SLC39A8Q9C0K1 460 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TAS2R14Q9NYV8 317 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SYN1P17600 705 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PLA2G16P53816 162 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAPK14Q16539 360 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCDC36Q8IYA8 594 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SLC6A15Q9H2J7 730 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ERVK-18Q9QC07 812 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PER2O15055 1255 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ACRP10323 421 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SULT2A1Q06520 285 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCINQ13939 588 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C10orf107Q8IVU9 208 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms