RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 A6NCN8 305 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 TARM1B6A8C7 271 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 PRAMEF26H0Y7S4 382 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 H3BQF6 201 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 NUAK1O60285 661 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 NIPSNAP2O75323 286 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 GPC4O75487 556 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 EML2O95834 649 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ITGA2BP08514 1039 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 TGM1P22735 817 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CCNFP41002 786 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 SLCO1A2P46721 670 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 NUBP1P53384 320 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CSE1LP55060 971 aaKnown RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 PRAMEP78395 509 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 SLC18A2Q05940 514 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 NAB1Q13506 487 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 BMPR2Q13873 1038 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ZNF460Q14592 562 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ZXDCQ2QGD7 858 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ALG11Q2TAA5 492 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 USP39Q53GS9 565 aaKnown RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 PYCR3Q53H96 274 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ZRANB3Q5FWF4 1079 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 GRTP1Q5TC63 336 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CERS6Q6ZMG9 384 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 Q6ZSR6 202 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CDHR3Q6ZTQ4 885 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CEP128Q6ZU80 1094 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CMC1Q7Z7K0 106 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 EXOC3L1Q86VI1 746 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 SFTPA2Q8IWL1 248 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 KRT222Q8N1A0 295 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 PLD6Q8N2A8 252 aaKnown RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 DCLK2Q8N568 766 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 OXR1Q8N573 874 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 BEND7Q8N7W2 519 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CD200R1Q8TD46 325 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 DLG3Q92796 817 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 VPS39Q96JC1 886 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 HSPA12BQ96MM6 686 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 NDNQ99608 321 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 MYOCQ99972 504 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 FAM167BQ9BTA0 163 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ROPN1BQ9BZX4 212 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 ROPN1Q9HAT0 212 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 MRPL40Q9NQ50 206 aaKnown RBP9.76□□□□□ -0.85
SF3A1-207ENST00000471342 RAD18Q9NS91 495 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 EMCNQ9ULC0 261 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 CRYL1Q9Y2S2 319 aa9.76□□□□□ -0.85
SF3A1-207ENST00000471342 FRYLO94915 3013 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 SPTY2D1-AS1A0A0U1RR47 76 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 SLC5A10A0PJK1 596 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 H3BMM5 538 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 NEMP1O14524 444 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 PRMT5O14744 637 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 IVLP07476 585 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 SLC35E2BP0CK96 405 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 TPBGLP0DKB5 382 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 MYCLP1P12525 358 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 PKMP14618 531 aaKnown RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 ITGALP20701 1170 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 AOAHP28039 575 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 FMO4P31512 558 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 GPR1P46091 355 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 CD151P48509 253 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 PRLHRP49683 370 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 RPL6Q02878 288 aaKnown RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 CCDC15Q0P6D6 951 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 NFATC4Q14934 902 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 KLHL38Q2WGJ6 581 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 MAP9Q49MG5 647 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 FASTKD1Q53R41 847 aaKnown RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 HECTD2Q5U5R9 776 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 RAET1GQ6H3X3 334 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 NAPRTQ6XQN6 538 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 SLC36A4Q6YBV0 504 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 ATG14Q6ZNE5 492 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 TRABD2AQ86V40 505 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 CENPLQ8N0S6 344 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 CCL4L1Q8NHW4 92 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 PDXPQ96GD0 296 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 CLPBQ9H078 707 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 C12orf65Q9H3J6 166 aaKnown RBP9.75□□□□□ -0.85
SF3A1-207ENST00000471342 IGSF5Q9NSI5 407 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 PRKAB1Q9Y478 270 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 SLC30A1Q9Y6M5 507 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 GON4LQ3T8J9 2241 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 FANCMQ8IYD8 2048 aa9.75□□□□□ -0.85
SF3A1-207ENST00000471342 FAM95CA0A1B0GW59 222 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 POC1B-GALNT4F8VUJ3 575 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 VILLO15195 856 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 TYROBPO43914 113 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 ERLIN1O75477 346 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
SF3A1-207ENST00000471342 ATP1B2P14415 290 aaPredicted RBP9.74□□□□□ -0.85
SF3A1-207ENST00000471342 BRAFP15056 766 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 PAMP19021 973 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 NUDT1P36639 197 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms