RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RRP36Q96EU6 259 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 SENP5Q96HI0 755 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ABHD8Q96I13 439 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 LRR1Q96L50 414 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ASCL2Q99929 193 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 RAB6CQ9H0N0 254 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 SIL1Q9H173 461 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 RANBP17Q9H2T7 1088 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 BICC1Q9H694 974 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 TRPC7Q9HCX4 862 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 UBN1Q9NPG3 1134 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 TCP11L1Q9NUJ3 509 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 DLGAP2Q9P1A6 1054 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 FBXW11Q9UKB1 542 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ACAD8Q9UKU7 415 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 CRYL1Q9Y2S2 319 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 C2CD2Q9Y426 696 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 JRKLQ9Y4A0 524 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 A0A0G2JLW4 131 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 A0A0G2JNG1 304 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 HHLA1C9JL84 531 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 CLIC2O15247 247 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 SYNCRIPO60506 623 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 JRKO75564 520 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 SLC25A12O75746 678 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 KRT19P08727 400 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 UBL4AP11441 157 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 GNB3P16520 340 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 GNAZP19086 355 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 HOXA13P31271 388 aaPredicted RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 BSGP35613 385 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 PRCPP42785 496 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 DRG2P55039 364 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 TAS2R40P59535 323 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 ZBED6P86452 979 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 KIR2DS5Q14953 304 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 ZRSR2Q15696 482 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 CCNG2Q16589 344 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM95Q3KNT9 176 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 NSUN5P2Q63ZY6 315 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF772Q68DY9 489 aaPredicted RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF790Q6PG37 636 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 CYP20A1Q6UW02 462 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 R3HCC1LQ7Z5L2 792 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 RASGEF1CQ8N431 466 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 GBGT1Q8N5D6 347 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 C1orf52Q8N6N3 182 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM116Q8NCL8 245 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 TRIM58Q8NG06 486 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 WDR20Q8TBZ3 569 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 HM13Q8TCT9 377 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF473Q8WTR7 871 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM190Q8WZ59 177 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 PERPQ96FX8 193 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 EGLN2Q96KS0 407 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 MAP7D2Q96T17 732 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 SLX1AQ9BQ83 275 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 PSD2Q9BQI7 771 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 MAGIXQ9H6Y5 334 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 POLR1BQ9H9Y6 1135 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 APOBEC3GQ9HC16 384 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 RANGRFQ9HD47 186 aaPredicted RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 ADPRHL2Q9NX46 363 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 OGFRQ9NZT2 677 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 UBA2Q9UBT2 640 aaPredicted RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 CNOT8Q9UFF9 292 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 LIMA1Q9UHB6 759 aaKnown RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 B3GALT5Q9Y2C3 310 aa1.33□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM184BQ9Y519 407 aaPredicted RBP1.33□□□□□ -2.2
UBXN4-207ENST00000471246 A0A087X002 238 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 IGKV3D-20A0A0C4DH25 116 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 A0A1W2PPH5 198 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 DUXAA6NLW8 204 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 H0YIN7 160 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 HCRTR2O43614 444 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 PLPP2O43688 288 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 EXTL3O43909 919 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 NDUFS3O75489 264 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CAVIN2O95810 425 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 AGR2O95994 175 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 IGLV1-44P01699 117 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CLEC3BP05452 202 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 LIPFP07098 398 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CD48P09326 243 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 SPARCP09486 303 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 IGHV4-38-2P0DP08 117 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 ATP1A3P13637 1013 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 KRT5P13647 590 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 MSH3P20585 1137 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 HRH2P25021 359 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 KRT2P35908 639 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 MAP2K2P36507 400 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CLK1P49759 484 aaKnown RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 MMP15P51511 669 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CCR9P51686 369 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 CTSCP53634 463 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 GOLGA8DPQ0D2H9 430 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 LRMPQ12912 555 aa1.32□□□□□ -2.2
UBXN4-207ENST00000471246 MVPQ14764 893 aaKnown RBP1.32□□□□□ -2.2
UBXN4-207ENST00000471246 TBCEQ15813 527 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms