RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-208	ENST00000470243	CALML4	Q96GE6	196 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	COG3	Q96JB2	828 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	NLRP4	Q96MN2	994 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	GFM1	Q96RP9	751 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	TMEM47	Q9BQJ4	181 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	LRRCC1	Q9C099	1032 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	ISCU	Q9H1K1	167 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	SMARCAD1	Q9H4L7	1026 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	SLC28A3	Q9HAS3	691 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	CLK4	Q9HAZ1	481 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	FZD3	Q9NPG1	666 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	CEPT1	Q9Y6K0	416 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	DDX60	Q8IY21	1712 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	MYH7	P12883	1935 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	TRIO	O75962	3097 aa		4.23	□□□□□ -1.73
SRRM1-208	ENST00000470243	UTY	O14607	1347 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ELP1	O95163	1332 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	UBR2	Q8IWV8	1755 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	LY6G6E	A0A0G2JKS1	128 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	IGLV5-39	A0A0G2JS06	123 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243		A0A1W2PQ09	198 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	HTATSF1	O43719	755 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ADCY5	O95622	1261 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	STARD3NL	O95772	234 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	RB1	P06400	928 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	CYC1	P08574	325 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ZNF182	P17025	639 aa	Predicted RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MYF6	P23409	242 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	CHML	P26374	656 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	GCH1	P30793	250 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	HSPA4	P34932	840 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	EPS15	P42566	896 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ME1	P48163	572 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PMS2	P54278	862 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PRAME	P78395	509 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	GABPB1	Q06547	395 aa	Predicted RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	NAE1	Q13564	534 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MYBPC2	Q14324	1141 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PKN2	Q16513	984 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	C2orf68	Q2NKX9	166 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PRTG	Q2VWP7	1150 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MANEA	Q5SRI9	462 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ANKRD54	Q6NXT1	300 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	DLK2	Q6UY11	383 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243		Q6ZTK2	550 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PATL1	Q86TB9	770 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MIGA1	Q8NAN2	632 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	BEST2	Q8NFU1	509 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	KIAA1524	Q8TCG1	905 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	RPL36AL	Q969Q0	106 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	VOPP1	Q96AW1	172 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	FAM122A	Q96E09	287 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PPP1R13B	Q96KQ4	1090 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	SLITRK1	Q96PX8	696 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	SRSF8	Q9BRL6	282 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	FUCA2	Q9BTY2	467 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MAK16	Q9BXY0	300 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	FOXP1	Q9H334	677 aa	Predicted RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	PDZD7	Q9H5P4	517 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	ANKEF1	Q9NU02	776 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	SETD4	Q9NVD3	440 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	TMEM51	Q9NW97	253 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MTMR6	Q9Y217	621 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	SRPRB	Q9Y5M8	271 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	SESN1	Q9Y6P5	492 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	SPEF2	Q9C093	1822 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MRC1	P22897	1456 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	WDR87	Q6ZQQ6	2873 aa		4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	TCF20	Q9UGU0	1960 aa	Known RBP	4.22	□□□□□ -1.73
SRRM1-208	ENST00000470243	MAP3K19	Q56UN5	1328 aa		4.21	□□□□□ -1.73
SRRM1-208	ENST00000470243	NCAPD2	Q15021	1401 aa		4.21	□□□□□ -1.73
SRRM1-208	ENST00000470243	TMEM202	A6NGA9	273 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	SMTNL1	A8MU46	457 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243		B4DLN1	442 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243		J3KR12	359 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	VCY	O14598	125 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	TIMM23	O14925	209 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	HCRTR2	O43614	444 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	TMCC2	O75069	709 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	NDUFS3	O75489	264 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	SLC25A12	O75746	678 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	TSPAN9	O75954	239 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	PGM3	O95394	542 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	SYF2	O95926	243 aa	Known RBP	4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	HMOX1	P09601	288 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	CCDC192	P0DO97	292 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	AKR1B1	P15121	316 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	GNLY	P22749	145 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	CHAT	P28329	748 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	PIK3CA	P42336	1068 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	RFX5	P48382	616 aa	Predicted RBP	4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	COMP	P49747	757 aa	Predicted RBP	4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	RASSF2	P50749	326 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	GALC	P54803	685 aa		4.21	□□□□□ -1.74
SRRM1-208	ENST00000470243	HUNK	P57058	714 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms