RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 TUBGCP5Q96RT8 1024 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 NRTNQ99748 197 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 CRACR2AQ9BSW2 395 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 GPR87Q9BY21 358 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 PRM3Q9NNZ6 103 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 SIX2Q9NPC8 291 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 CNOT8Q9UFF9 292 aaKnown RBP8.03□□□□□ -1.12
LSM2-210ENST00000470086 SLC23A2Q9UGH3 650 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 SNX7Q9UNH6 387 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 PCDHGC4Q9Y5F7 938 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 PCDHGB6Q9Y5F9 930 aa8.03□□□□□ -1.12
LSM2-210ENST00000470086 TMEM200CA6NKL6 621 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 WASH4PA8MWX3 477 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 PRAMEF11O60813 436 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 LILRA1O75019 489 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 CPNE3O75131 537 aaKnown RBP8.02□□□□□ -1.13
LSM2-210ENST00000470086 SCRG1O75711 98 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 CPP00450 1065 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 MT-ND3P03897 115 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 SLC9A1P19634 815 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 OTX2P32243 289 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 USP8P40818 1118 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 GPR1P46091 355 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 CBLBQ13191 982 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ZNF235Q14590 738 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 MYBPC3Q14896 1274 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 CFAP58Q5T655 872 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ZNF385CQ66K41 422 aaPredicted RBP8.02□□□□□ -1.13
LSM2-210ENST00000470086 ZNF324BQ6AW86 544 aaPredicted RBP8.02□□□□□ -1.13
LSM2-210ENST00000470086 IRGCQ6NXR0 463 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 TRIM65Q6PJ69 517 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ADAMTSL4Q6UY14 1074 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 KRBA2Q6ZNG9 492 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ZNF765Q7L2R6 523 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 TRIM59Q8IWR1 403 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ARHGAP12Q8IWW6 846 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 GALNT16Q8N428 558 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ACBD4Q8NC06 268 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 FAR1Q8WVX9 515 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 CASKIN2Q8WXE0 1202 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ZNF396Q96N95 335 aaPredicted RBP8.02□□□□□ -1.13
LSM2-210ENST00000470086 TAAR6Q96RI8 345 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 MAP3K3Q99759 626 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 SLC39A8Q9C0K1 460 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ATP13A3Q9H7F0 1226 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 UPF2Q9HAU5 1272 aaKnown RBP8.02□□□□□ -1.13
LSM2-210ENST00000470086 LATS2Q9NRM7 1088 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 PCMTD2Q9NV79 361 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 SEMA5BQ9P283 1151 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 HPCAL4Q9UM19 191 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 INTS1Q8N201 2190 aaKnown RBP8.02□□□□□ -1.13
LSM2-210ENST00000470086 CSPG4Q6UVK1 2322 aa8.02□□□□□ -1.13
LSM2-210ENST00000470086 ZANQ9Y493 2812 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 FAM237AA0A1B0GTK4 181 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 PDE2AO00408 941 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 HTRA2O43464 458 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 KLF7O75840 302 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 F13A1P00488 732 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 MYL1P05976 194 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 PDHA1P08559 390 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 BMP2P12643 396 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 TEAD1P28347 426 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 CDH5P33151 784 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 RPS15P62841 145 aaKnown RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 FKBP3Q00688 224 aaKnown RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 BCL2L1Q07817 233 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 GTF3C1Q12789 2109 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 FOXD4Q12950 439 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 PAK1Q13153 545 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 FAM182AQ5T1J6 154 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 LRRC66Q68CR7 880 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 DPY19L2P1Q6NXN4 242 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 SLC9B2Q86UD5 537 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 HPS6Q86YV9 775 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 TTC30BQ8N4P2 665 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 ARFGAP1Q8N6T3 406 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 SIDT2Q8NBJ9 832 aaKnown RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 ZNF514Q96K75 400 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 MCCC1Q96RQ3 725 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 WDR77Q9BQA1 342 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 GPATCH2LQ9NWQ4 482 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 C5AR2Q9P296 337 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 ZNHIT2Q9UHR6 403 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 RARRES3Q9UL19 164 aa8.01□□□□□ -1.13
LSM2-210ENST00000470086 RPH3AQ9Y2J0 694 aaPredicted RBP8.01□□□□□ -1.13
LSM2-210ENST00000470086 COL6A5A8TX70 2615 aa8□□□□□ -1.13
LSM2-210ENST00000470086 STAB1Q9NY15 2570 aa8□□□□□ -1.13
LSM2-210ENST00000470086 C2CD4BA6NLJ0 364 aa8□□□□□ -1.13
LSM2-210ENST00000470086 TOX3O15405 576 aaPredicted RBP8□□□□□ -1.13
LSM2-210ENST00000470086 JRKO75564 520 aa8□□□□□ -1.13
LSM2-210ENST00000470086 CTSBP07858 339 aa8□□□□□ -1.13
LSM2-210ENST00000470086 KLK2P20151 261 aa8□□□□□ -1.13
LSM2-210ENST00000470086 EPHB2P29323 1055 aa8□□□□□ -1.13
LSM2-210ENST00000470086 SSTR2P30874 369 aa8□□□□□ -1.13
LSM2-210ENST00000470086 SCNN1AP37088 669 aa8□□□□□ -1.13
LSM2-210ENST00000470086 TSFMP43897 325 aaKnown RBP8□□□□□ -1.13
LSM2-210ENST00000470086 NOP2P46087 812 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms