RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IL17CQ9P0M4 197 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL9A3-208ENST00000469802 PCDHB11Q9Y5F2 797 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 BSNQ9UPA5 3926 aa16.07■□□□□ 0.16
COL9A3-208ENST00000469802 RCCD1A6NED2 376 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 ITGB2P05107 769 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 PLA2G2AP14555 144 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 BRAFP15056 766 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 XRCC1P18887 633 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-208ENST00000469802 HLA-DPA1P20036 260 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 CTNNA1P35221 906 aaKnown RBP16.06■□□□□ 0.16
COL9A3-208ENST00000469802 PTPN7P35236 360 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 CYLC1P35663 651 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-208ENST00000469802 RAB15P59190 212 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 MPP3Q13368 585 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 INSCQ1MX18 579 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 PLA2G4EQ3MJ16 856 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 DAAM2Q86T65 1068 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 NKD1Q969G9 470 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 MRFAP1L1Q96HT8 127 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 PANX2Q96RD6 677 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 TBC1D10AQ9BXI6 508 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 ASPSCR1Q9BZE9 553 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 ZMYND15Q9H091 742 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 GBA3Q9H227 469 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 OSGEPL1Q9H4B0 414 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 BPIFA1Q9NP55 256 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 LUC7LQ9NQ29 371 aaKnown RBP16.06■□□□□ 0.16
COL9A3-208ENST00000469802 OGFRQ9NZT2 677 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 ZNF624Q9P2J8 865 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-208ENST00000469802 TRHDEQ9UKU6 1024 aa16.06■□□□□ 0.16
COL9A3-208ENST00000469802 BOD1L1Q8NFC6 3051 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 SOWAHDA6NJG2 315 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 EFCAB7A8K855 629 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 F5H423 210 aaPredicted RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 GAPDHSO14556 408 aaPredicted RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 NDUFA10O95299 355 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 C9P02748 559 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 ANKRD34CP0C6C1 535 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 UGT1A3P35503 534 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 SPAM1P38567 509 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 ZNF75DP51815 510 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 COPS2P61201 443 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 LINC00303Q3SY05 128 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 AGAP9Q5VTM2 703 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 ZDHHC20Q5W0Z9 365 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 ANKS6Q68DC2 871 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 ABRAXAS1Q6UWZ7 409 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 WASH2PQ6VEQ5 465 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 TMEM26Q6ZUK4 368 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 PID1Q7Z2X4 250 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 FAM129CQ86XR2 697 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 IPMKQ8NFU5 416 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 CALR3Q96L12 384 aaKnown RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 TEFMQ96QE5 360 aaKnown RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 HEMGNQ9BXL5 484 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 SPRY4Q9C004 299 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 WASH6PQ9NQA3 447 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 WDR70Q9NW82 654 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 SMOXQ9NWM0 555 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 SLC39A1Q9NY26 324 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 RSPH14Q9UHP6 348 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 EFR3BQ9Y2G0 817 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 REXO2Q9Y3B8 237 aaKnown RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 PCDHA3Q9Y5H8 950 aa16.05■□□□□ 0.16
COL9A3-208ENST00000469802 EPN1Q9Y6I3 576 aaPredicted RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 TLN1Q9Y490 2541 aaKnown RBP16.05■□□□□ 0.16
COL9A3-208ENST00000469802 TENM4Q6N022 2769 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 BTNL10A8MVZ5 291 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 PJA2O43164 708 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 GPR39O43194 453 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 CDK14O94921 469 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 RBL1P28749 1068 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 CA5AP35218 305 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 SLC19A1P41440 591 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 ATP1A2P50993 1020 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 MC2RQ01718 297 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 TMEM115Q12893 351 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-208ENST00000469802 DCAF12Q5T6F0 453 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 SLC25A41Q8N5S1 370 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 DDHD1Q8NEL9 900 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 ACTL9Q8TC94 416 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 NCSTNQ92542 709 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 RTP4Q96DX8 246 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 POT1Q9NUX5 634 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 SIDT1Q9NXL6 827 aaKnown RBP16.04■□□□□ 0.16
COL9A3-208ENST00000469802 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL9A3-208ENST00000469802 DNAJC16Q9Y2G8 782 aa16.04■□□□□ 0.16
COL9A3-208ENST00000469802 A8MU76 341 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 PPFIA2O75334 1257 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 CTNNA2P26232 953 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 ADRA1AP35348 466 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 MAPK9P45984 424 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 GFERP55789 205 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 OTUD4Q01804 1114 aaKnown RBP16.03■□□□□ 0.16
COL9A3-208ENST00000469802 DMPKQ09013 629 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 CHRNA6Q15825 494 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 SNAP47Q5SQN1 464 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 XKR5Q6UX68 686 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 FAM151BQ6UXP7 276 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms