RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 BDNFP23560 247 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 ACAT1P24752 427 aaKnown RBP4.84□□□□□ -1.63
VPS8-219ENST00000469479 TNFRSF8P28908 595 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 MFAP3P55082 362 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 RBP5P82980 135 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 SHBQ15464 509 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 TBCCQ15814 346 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 ISXQ2M1V0 245 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 C3orf38Q5JPI3 329 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 KCNT1Q5JUK3 1230 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 ADALQ6DHV7 355 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 NAPEPLDQ6IQ20 393 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 RINT1Q6NUQ1 792 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 RBM44Q6ZP01 1051 aaKnown RBP4.84□□□□□ -1.63
VPS8-219ENST00000469479 DSG4Q86SJ6 1040 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 NANOGP1Q8N7R0 232 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 ZNF557Q8N988 423 aaPredicted RBP4.84□□□□□ -1.63
VPS8-219ENST00000469479 POC1BQ8TC44 478 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 MAPK15Q8TD08 544 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 GANCQ8TET4 914 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 SERAC1Q96JX3 654 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 SMOQ99835 787 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 DCLK3Q9C098 648 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 CIPCQ9C0C6 399 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 AMBRA1Q9C0C7 1298 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 TLR8Q9NR97 1041 aaKnown RBP4.84□□□□□ -1.63
VPS8-219ENST00000469479 NLGN3Q9NZ94 848 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 AGO2Q9UKV8 859 aaKnown RBP4.84□□□□□ -1.63
VPS8-219ENST00000469479 AGAP1Q9UPQ3 857 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 SATB2Q9UPW6 733 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 MAPRE3Q9UPY8 281 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 SNX14Q9Y5W7 946 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 SNX9Q9Y5X1 595 aa4.84□□□□□ -1.63
VPS8-219ENST00000469479 ABCA2Q9BZC7 2435 aa4.84□□□□□ -1.64
VPS8-219ENST00000469479 UBE4BO95155 1302 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 A0A1W2PR77 199 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 FAM92AA1XBS5 289 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 FAM90A10PA6NDY2 464 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 LATO43561 262 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 TLR5O60602 858 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 LDHAP00338 332 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 ZDHHC11BP0C7U3 371 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 THEGLP0DJG4 465 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 IRF1P10914 325 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 LIPCP11150 499 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 KRT10P13645 584 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 TRIM21P19474 475 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 WARSP23381 471 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 PRKCHP24723 683 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 ATP5C1P36542 298 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 ARHGAP25P42331 645 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 TFAMQ00059 246 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 KRTAP27-1Q3LI81 207 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 EARS2Q5JPH6 523 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 TEDDM1Q5T9Z0 273 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 TPGS1Q6ZTW0 290 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 RUFY3Q7L099 469 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 C14orf80Q86SX3 495 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 CMIPQ8IY22 773 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 DIS3L2Q8IYB7 885 aaKnown RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 SSC4DQ8WTU2 575 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 HVCN1Q96D96 273 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 PCED1BQ96HM7 432 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 CATSPER2Q96P56 530 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS8-219ENST00000469479 ACTRT3Q9BYD9 372 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 STRADBQ9C0K7 418 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 TMEM60Q9H2L4 133 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 TMEM245Q9H330 911 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 SNX25Q9H3E2 840 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 DMAP1Q9NPF5 467 aaPredicted RBP4.83□□□□□ -1.64
VPS8-219ENST00000469479 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 SUN2Q9UH99 717 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 PHTF1Q9UMS5 762 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 CYP46A1Q9Y6A2 500 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 STYXL1Q9Y6J8 313 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 SLCO1B1Q9Y6L6 691 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 MTORP42345 2549 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 CELSR1Q9NYQ6 3014 aa4.83□□□□□ -1.64
VPS8-219ENST00000469479 RP1L1Q8IWN7 2480 aaPredicted RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 PRRC2CQ9Y520 2896 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 A0A087X0B3 334 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 A0A1B0GVM2 712 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 VPS37CA5D8V6 355 aaPredicted RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 K7ENM7 598 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 NVLO15381 856 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 EPB41L2O43491 1005 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 TACC1O75410 805 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 TNFSF15O95150 251 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 DLDP09622 509 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 CPA1P15085 419 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 DGKAP23743 735 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 CD82P27701 267 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 PCSK6P29122 969 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 ACOT2P49753 483 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 GALCP54803 685 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 SCAND1P57086 179 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms