RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PDZK1P1A8MUH7 402 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 ZNF487B1APH4 448 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 GOLGA6L19H0YKK7 550 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 APOL1O14791 398 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 KMOO15229 486 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 ZNF7P17097 686 aaPredicted RBP17■□□□□ 0.31
TRIM56-203ENST00000467847 AMD1P17707 334 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 TCN2P20062 427 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 CDK18Q07002 472 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 MAP7Q14244 749 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 PDK1Q15118 436 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 SLC9A4Q6AI14 798 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 RNF31Q96EP0 1072 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 TIMM29Q9BSF4 260 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 MAK16Q9BXY0 300 aaKnown RBP17■□□□□ 0.31
TRIM56-203ENST00000467847 IFNKQ9P0W0 207 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 ZNF624Q9P2J8 865 aaPredicted RBP17■□□□□ 0.31
TRIM56-203ENST00000467847 ANAPC2Q9UJX6 822 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 SLC30A1Q9Y6M5 507 aa17■□□□□ 0.31
TRIM56-203ENST00000467847 PPP1R12AO14974 1030 aaPredicted RBP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 TOX3O15405 576 aaPredicted RBP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 VEGFDO43915 354 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 MTX2O75431 263 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 RASSF9O75901 435 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 BPIP17213 487 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 RPL10P27635 214 aaKnown RBP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 HNRNPH3P31942 346 aaKnown RBP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 CASRP41180 1078 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 SLC19A1P41440 591 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 LEPRP48357 1165 aaKnown RBP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 SEPHS1P49903 392 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 SEPT6Q14141 434 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 ATP1A1-AS1Q5TC04 95 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 ABHD17AQ96GS6 310 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 OR6C1Q96RD1 312 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 SLC25A51Q9H1U9 297 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 POT1Q9NUX5 634 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 MRPS18BQ9Y676 258 aaKnown RBP16.99■□□□□ 0.31
TRIM56-203ENST00000467847 RELNP78509 3460 aa16.99■□□□□ 0.31
TRIM56-203ENST00000467847 C3orf70A6NLC5 250 aaPredicted RBP16.98■□□□□ 0.31
TRIM56-203ENST00000467847 CDK14O94921 469 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 KRT1P04264 644 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 TMEM253P0C7T8 217 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 ZNF28P17035 718 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 DLSTP36957 453 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 SH3BP2P78314 561 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 SLC14A2Q15849 920 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 KHDC1Q4VXA5 237 aaKnown RBP16.98■□□□□ 0.31
TRIM56-203ENST00000467847 CRTC2Q53ET0 693 aaPredicted RBP16.98■□□□□ 0.31
TRIM56-203ENST00000467847 C6orf15Q6UXA7 325 aaPredicted RBP16.98■□□□□ 0.31
TRIM56-203ENST00000467847 NPNTQ6UXI9 565 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 B4GALNT4Q76KP1 1039 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 VSIG1Q86XK7 387 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 RASGRP3Q8IV61 690 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 ZNF547Q8IVP9 402 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 GALNT6Q8NCL4 622 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 SPATA22Q8NHS9 363 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 SLC35G2Q8TBE7 412 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 TADA1Q96BN2 335 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 STAMBPL1Q96FJ0 436 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 ELMO2Q96JJ3 720 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 OLFM3Q96PB7 478 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 ZNF768Q9H5H4 540 aaKnown RBP16.98■□□□□ 0.31
TRIM56-203ENST00000467847 PCDHB3Q9Y5E6 796 aa16.98■□□□□ 0.31
TRIM56-203ENST00000467847 A0A0A6YYK5 440 aaPredicted RBP16.97■□□□□ 0.31
TRIM56-203ENST00000467847 PRR19A6NJB7 356 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 OR52A4PA6NMU1 304 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 NDST3O95803 873 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 MT-CYBP00156 380 aaPredicted RBP16.97■□□□□ 0.31
TRIM56-203ENST00000467847 BRAFP15056 766 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 ZFXP17010 805 aaPredicted RBP16.97■□□□□ 0.31
TRIM56-203ENST00000467847 VCLP18206 1134 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 IDSP22304 550 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 F8A1P23610 371 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 CAPZBP47756 277 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 DRG2P55039 364 aaKnown RBP16.97■□□□□ 0.31
TRIM56-203ENST00000467847 DYNLT1P63172 113 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 GPR18Q14330 331 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 IL11RAQ14626 422 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 ODF2Q5BJF6 829 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 AGAP9Q5VTM2 703 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 ABRAXAS1Q6UWZ7 409 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 RFX6Q8HWS3 928 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 TRAPPC5Q8IUR0 188 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 GDAP1Q8TB36 358 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 RSC1A1Q92681 617 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 CXorf40BQ96DE9 158 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 VPS35Q96QK1 796 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 SRPK1Q96SB4 655 aaKnown RBP16.97■□□□□ 0.31
TRIM56-203ENST00000467847 GLOD4Q9HC38 313 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 BPIFA1Q9NP55 256 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 SLC40A1Q9NP59 571 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 TRIM10Q9UDY6 481 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 CROTQ9UKG9 612 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 KCTD3Q9Y597 815 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 SPO11Q9Y5K1 396 aa16.97■□□□□ 0.31
TRIM56-203ENST00000467847 AURKAO14965 403 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms