RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TMEM204Q9BSN7 226 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 CCDC106Q9BWC9 280 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 ERVMER34-1Q9H9K5 563 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 NOX4Q9NPH5 578 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 RCC2Q9P258 522 aaKnown RBP4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 LARSQ9P2J5 1176 aaKnown RBP4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 SIX4Q9UIU6 781 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 TSPYL4Q9UJ04 414 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 KLHL20Q9Y2M5 609 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 TRPV2Q9Y5S1 764 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 PTPRCP08575 1304 aa4.97□□□□□ -1.61
GAPVD1-211ENST00000467707 LILRA5A6NI73 299 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 H7C0S8 307 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 BUD23O43709 281 aaKnown RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 PRAMEF11O60813 436 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 APOA4P06727 396 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 FCGR1AP12314 374 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 HRH2P25021 359 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 SSTR2P30874 369 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 BNC1Q01954 994 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 ALCAMQ13740 583 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 NR1D2Q14995 579 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 PAPPA-AS1Q5QFB9 102 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 LDB1Q86U70 411 aaPredicted RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 RNF113BQ8IZP6 322 aaKnown RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 PGBD5Q8N414 524 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 SLC5A8Q8N695 610 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 TDRD5Q8NAT2 981 aaKnown RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 OR10S1Q8NGN2 331 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 PTERQ96BW5 349 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 C3orf30Q96M34 536 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 ZNF385AQ96PM9 386 aaKnown RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 CMKLR1Q99788 373 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 OR10A4Q9H209 315 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 TAS2R14Q9NYV8 317 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 BCCIPQ9P287 314 aaKnown RBP eCLIP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 CRNNQ9UBG3 495 aaPredicted RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 DDX25Q9UHL0 483 aaKnown RBP4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 PCDHGA5Q9Y5G8 931 aa4.96□□□□□ -1.62
GAPVD1-211ENST00000467707 TRBC2A0A5B9 178 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 A8MXE2 369 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ZBTB43O43298 467 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 PLPP2O43688 288 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ZNF217O75362 1048 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 S1PR1P21453 382 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 USP8P40818 1118 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 TMPOP42166 694 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CLDN20P56880 219 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 EEF1A1P68104 462 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 TUBA1BP68363 451 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ZNF155Q12901 538 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 TRAF3Q13114 568 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 MYBPHQ13203 477 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CCDC96Q2M329 555 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 FAM98BQ52LJ0 330 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 EEF1A1P5Q5VTE0 462 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ZNF534Q76KX8 674 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CEP97Q8IW35 865 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ADHFE1Q8IWW8 467 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 AFAP1Q8N556 730 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ZNF114Q8NC26 417 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 KCNH5Q8NCM2 988 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 SCARB1Q8WTV0 552 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 PIGTQ969N2 578 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 RADILQ96JH8 1075 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CFAP57Q96MR6 1250 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CDRT15Q96T59 188 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 GFI1Q99684 422 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 HGH1Q9BTY7 390 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 MOV10L1Q9BXT6 1211 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 PIH1D3Q9NQM4 214 aaKnown RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CCDC177Q9NQR7 707 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 OSGIN1Q9UJX0 560 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 ZHX1Q9UKY1 873 aaPredicted RBP4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 PADI3Q9ULW8 664 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 CCL27Q9Y4X3 112 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 PCDHAC2Q9Y5I4 1007 aa4.95□□□□□ -1.62
GAPVD1-211ENST00000467707 C15orf62A8K5M9 175 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 ANKRD66B4E2M5 251 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 MID1O15344 667 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 TBX10O75333 385 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 KCNK5O95279 499 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 CLDN14O95500 239 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 CCKBRP32239 447 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 CCR3P51677 355 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 RAD23AP54725 363 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 SNRPEP62304 92 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 DDR1Q08345 913 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 NFATC4Q14934 902 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 SETMARQ53H47 684 aaPredicted RBP4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 RHBDF2Q6PJF5 856 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 CHST3Q7LGC8 479 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 CCDC186Q7Z3E2 898 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 GALNT13Q8IUC8 556 aa4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 RBMXL3Q8N7X1 1067 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 PAPD5Q8NDF8 572 aaKnown RBP4.94□□□□□ -1.62
GAPVD1-211ENST00000467707 OR5R1Q8NH85 324 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms